Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mrpl55Q9CZ83 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.39
Mrpl55Q9CZ83 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Mrpl55Q9CZ83 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Mrpl55Q9CZ83 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Mrpl55Q9CZ83 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Mrpl55Q9CZ83 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 AC158990.1-201ENSMUST00000221450 2016 ntBASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Gm34220-201ENSMUST00000223001 2709 ntBASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mrpl55Q9CZ83 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Gm37415-201ENSMUST00000192265 2054 ntBASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mrpl55Q9CZ83 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Mrpl55Q9CZ83 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl55Q9CZ83 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.62□□□□□ -0.39
Mrpl55Q9CZ83 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Mrpl55Q9CZ83 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl55Q9CZ83 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Mrpl55Q9CZ83 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC12.62□□□□□ -0.39
Mrpl55Q9CZ83 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl55Q9CZ83 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
Mrpl55Q9CZ83 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl55Q9CZ83 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Mrpl55Q9CZ83 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl55Q9CZ83 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl55Q9CZ83 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Gm12821-201ENSMUST00000120022 600 ntBASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Golgb1-201ENSMUST00000023534 498 ntBASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl55Q9CZ83 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms