Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Q9CYI0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Q9CYI0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Q9CYI0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.35■■□□□ 1.01
Q9CYI0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q9CYI0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.35■■□□□ 1.01
Q9CYI0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.35■■□□□ 1.01
Q9CYI0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Q9CYI0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Q9CYI0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Q9CYI0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q9CYI0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q9CYI0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q9CYI0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Q9CYI0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Q9CYI0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.34■■□□□ 1.01
Q9CYI0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Q9CYI0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.34■■□□□ 1.01
Q9CYI0 Reep4-203ENSMUST00000226563 1444 ntBASIC21.34■■□□□ 1.01
Q9CYI0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q9CYI0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q9CYI0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q9CYI0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Q9CYI0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Q9CYI0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.33■■□□□ 1.01
Q9CYI0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Q9CYI0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.33■■□□□ 1.01
Q9CYI0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Q9CYI0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Q9CYI0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.33■■□□□ 1.01
Q9CYI0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Q9CYI0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Q9CYI0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Q9CYI0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.32■■□□□ 1
Q9CYI0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Q9CYI0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.32■■□□□ 1
Q9CYI0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.32■■□□□ 1
Q9CYI0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Q9CYI0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Q9CYI0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Q9CYI0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.31■■□□□ 1
Q9CYI0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.31■■□□□ 1
Q9CYI0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Q9CYI0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.31■■□□□ 1
Q9CYI0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Q9CYI0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Q9CYI0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Q9CYI0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Q9CYI0 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.3■■□□□ 1
Q9CYI0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Q9CYI0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Q9CYI0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Q9CYI0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Q9CYI0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.29■■□□□ 1
Q9CYI0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Q9CYI0 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.29■■□□□ 1
Q9CYI0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Q9CYI0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.29■■□□□ 1
Q9CYI0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.29■■□□□ 1
Q9CYI0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Q9CYI0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Q9CYI0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.28■■□□□ 1
Q9CYI0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Q9CYI0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.28■■□□□ 1
Q9CYI0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.28■■□□□ 1
Q9CYI0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.28■■□□□ 1
Q9CYI0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.28■■□□□ 1
Q9CYI0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.28■■□□□ 1
Q9CYI0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.28■■□□□ 1
Q9CYI0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Q9CYI0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Q9CYI0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Q9CYI0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.27■■□□□ 1
Q9CYI0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.27■■□□□ 1
Q9CYI0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Q9CYI0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.27■■□□□ 1
Q9CYI0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.27■■□□□ 1
Q9CYI0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Q9CYI0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Q9CYI0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Q9CYI0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Q9CYI0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Q9CYI0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Q9CYI0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Q9CYI0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Q9CYI0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Q9CYI0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Q9CYI0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Q9CYI0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Q9CYI0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Q9CYI0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Q9CYI0 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.24■□□□□ 0.99
Q9CYI0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Q9CYI0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Q9CYI0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.24■□□□□ 0.99
Q9CYI0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Q9CYI0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Q9CYI0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Q9CYI0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Q9CYI0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms