Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim13Q9CYB0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim13Q9CYB0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim13Q9CYB0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim13Q9CYB0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim13Q9CYB0 Gm5812-201ENSMUST00000061073 957 ntBASIC17.78■□□□□ 0.44
Trim13Q9CYB0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Trim13Q9CYB0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim13Q9CYB0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trim13Q9CYB0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.77■□□□□ 0.44
Trim13Q9CYB0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim13Q9CYB0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim13Q9CYB0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trim13Q9CYB0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim13Q9CYB0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim13Q9CYB0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim13Q9CYB0 Golph3-205ENSMUST00000228671 2842 ntBASIC17.77■□□□□ 0.44
Trim13Q9CYB0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim13Q9CYB0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim13Q9CYB0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim13Q9CYB0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim13Q9CYB0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.77■□□□□ 0.43
Trim13Q9CYB0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim13Q9CYB0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.77■□□□□ 0.43
Trim13Q9CYB0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trim13Q9CYB0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim13Q9CYB0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim13Q9CYB0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim13Q9CYB0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trim13Q9CYB0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim13Q9CYB0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim13Q9CYB0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim13Q9CYB0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Trim13Q9CYB0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim13Q9CYB0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim13Q9CYB0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Trim13Q9CYB0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim13Q9CYB0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.75■□□□□ 0.43
Trim13Q9CYB0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim13Q9CYB0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim13Q9CYB0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim13Q9CYB0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim13Q9CYB0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim13Q9CYB0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim13Q9CYB0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim13Q9CYB0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim13Q9CYB0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim13Q9CYB0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim13Q9CYB0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim13Q9CYB0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim13Q9CYB0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim13Q9CYB0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Trim13Q9CYB0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim13Q9CYB0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim13Q9CYB0 Gm40881-201ENSMUST00000223397 166 ntBASIC17.73■□□□□ 0.43
Trim13Q9CYB0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim13Q9CYB0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim13Q9CYB0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim13Q9CYB0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim13Q9CYB0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim13Q9CYB0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim13Q9CYB0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim13Q9CYB0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms