Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 Gm12251-201ENSMUST00000117893 792 ntBASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrc40Q9CRC8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrc40Q9CRC8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrc40Q9CRC8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrc40Q9CRC8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrc40Q9CRC8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.12■□□□□ 0.65
Lrrc40Q9CRC8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.12■□□□□ 0.65
Lrrc40Q9CRC8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrc40Q9CRC8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrc40Q9CRC8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrc40Q9CRC8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrc40Q9CRC8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrc40Q9CRC8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrc40Q9CRC8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrc40Q9CRC8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrc40Q9CRC8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrc40Q9CRC8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrc40Q9CRC8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrc40Q9CRC8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Lrrc40Q9CRC8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrc40Q9CRC8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrc40Q9CRC8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrc40Q9CRC8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrc40Q9CRC8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrc40Q9CRC8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrc40Q9CRC8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrc40Q9CRC8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrc40Q9CRC8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrc40Q9CRC8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrc40Q9CRC8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrc40Q9CRC8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Lrrc40Q9CRC8 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.1■□□□□ 0.65
Lrrc40Q9CRC8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lrrc40Q9CRC8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrrc40Q9CRC8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lrrc40Q9CRC8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.09■□□□□ 0.65
Lrrc40Q9CRC8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Lrrc40Q9CRC8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrrc40Q9CRC8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrrc40Q9CRC8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lrrc40Q9CRC8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.08■□□□□ 0.64
Lrrc40Q9CRC8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.08■□□□□ 0.64
Lrrc40Q9CRC8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Lrrc40Q9CRC8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Lrrc40Q9CRC8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrrc40Q9CRC8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Mir7075-201ENSMUST00000184187 82 ntBASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lrrc40Q9CRC8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Gm12821-201ENSMUST00000120022 600 ntBASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms