Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msantd3Q9CR78 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.49■□□□□ 0.55
Msantd3Q9CR78 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.49■□□□□ 0.55
Msantd3Q9CR78 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Msantd3Q9CR78 Nespas-201ENSMUST00000143738 1083 ntBASIC18.49■□□□□ 0.55
Msantd3Q9CR78 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Msantd3Q9CR78 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msantd3Q9CR78 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.49■□□□□ 0.55
Msantd3Q9CR78 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msantd3Q9CR78 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msantd3Q9CR78 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.48■□□□□ 0.55
Msantd3Q9CR78 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.48■□□□□ 0.55
Msantd3Q9CR78 Gm20760-201ENSMUST00000179197 648 ntBASIC18.48■□□□□ 0.55
Msantd3Q9CR78 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.48■□□□□ 0.55
Msantd3Q9CR78 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.48■□□□□ 0.55
Msantd3Q9CR78 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.48■□□□□ 0.55
Msantd3Q9CR78 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.48■□□□□ 0.55
Msantd3Q9CR78 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msantd3Q9CR78 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Msantd3Q9CR78 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Msantd3Q9CR78 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msantd3Q9CR78 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msantd3Q9CR78 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.48■□□□□ 0.55
Msantd3Q9CR78 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.47■□□□□ 0.55
Msantd3Q9CR78 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Msantd3Q9CR78 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.47■□□□□ 0.55
Msantd3Q9CR78 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msantd3Q9CR78 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Msantd3Q9CR78 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msantd3Q9CR78 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Msantd3Q9CR78 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Msantd3Q9CR78 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Msantd3Q9CR78 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.47■□□□□ 0.55
Msantd3Q9CR78 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msantd3Q9CR78 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Msantd3Q9CR78 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Msantd3Q9CR78 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msantd3Q9CR78 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Msantd3Q9CR78 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Msantd3Q9CR78 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Msantd3Q9CR78 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msantd3Q9CR78 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msantd3Q9CR78 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.46■□□□□ 0.55
Msantd3Q9CR78 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msantd3Q9CR78 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msantd3Q9CR78 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msantd3Q9CR78 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Msantd3Q9CR78 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Msantd3Q9CR78 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Msantd3Q9CR78 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msantd3Q9CR78 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Msantd3Q9CR78 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Msantd3Q9CR78 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.45■□□□□ 0.54
Msantd3Q9CR78 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Msantd3Q9CR78 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.44■□□□□ 0.54
Msantd3Q9CR78 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Msantd3Q9CR78 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Msantd3Q9CR78 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.44■□□□□ 0.54
Msantd3Q9CR78 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msantd3Q9CR78 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.44■□□□□ 0.54
Msantd3Q9CR78 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msantd3Q9CR78 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Msantd3Q9CR78 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Msantd3Q9CR78 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
Msantd3Q9CR78 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msantd3Q9CR78 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msantd3Q9CR78 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Msantd3Q9CR78 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Msantd3Q9CR78 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msantd3Q9CR78 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.43■□□□□ 0.54
Msantd3Q9CR78 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Msantd3Q9CR78 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.43■□□□□ 0.54
Msantd3Q9CR78 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msantd3Q9CR78 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Msantd3Q9CR78 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msantd3Q9CR78 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msantd3Q9CR78 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Msantd3Q9CR78 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.43■□□□□ 0.54
Msantd3Q9CR78 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msantd3Q9CR78 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msantd3Q9CR78 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.41■□□□□ 0.54
Msantd3Q9CR78 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Msantd3Q9CR78 Gm13534-201ENSMUST00000121169 513 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms