Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Gm13241-201ENSMUST00000094493 780 ntBASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf111Q99ML9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf111Q99ML9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rnf111Q99ML9 Rarb-207ENSMUST00000225921 2756 ntBASIC18.66■□□□□ 0.58
Rnf111Q99ML9 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.66■□□□□ 0.58
Rnf111Q99ML9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf111Q99ML9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf111Q99ML9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.66■□□□□ 0.58
Rnf111Q99ML9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rnf111Q99ML9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf111Q99ML9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf111Q99ML9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf111Q99ML9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.65■□□□□ 0.58
Rnf111Q99ML9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rnf111Q99ML9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf111Q99ML9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf111Q99ML9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf111Q99ML9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf111Q99ML9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf111Q99ML9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf111Q99ML9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf111Q99ML9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.64■□□□□ 0.57
Rnf111Q99ML9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf111Q99ML9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf111Q99ML9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf111Q99ML9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Rnf111Q99ML9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf111Q99ML9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf111Q99ML9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Gm21956-201ENSMUST00000179946 522 ntBASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf111Q99ML9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rnf111Q99ML9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf111Q99ML9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf111Q99ML9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.62■□□□□ 0.57
Rnf111Q99ML9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rnf111Q99ML9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.62■□□□□ 0.57
Rnf111Q99ML9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf111Q99ML9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf111Q99ML9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf111Q99ML9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Rnf111Q99ML9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf111Q99ML9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf111Q99ML9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.61■□□□□ 0.57
Rnf111Q99ML9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf111Q99ML9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf111Q99ML9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf111Q99ML9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf111Q99ML9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf111Q99ML9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf111Q99ML9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Rnf111Q99ML9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf111Q99ML9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf111Q99ML9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf111Q99ML9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf111Q99ML9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf111Q99ML9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf111Q99ML9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf111Q99ML9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf111Q99ML9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.6■□□□□ 0.57
Rnf111Q99ML9 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.6■□□□□ 0.57
Rnf111Q99ML9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf111Q99ML9 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.6■□□□□ 0.57
Rnf111Q99ML9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf111Q99ML9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.6■□□□□ 0.57
Rnf111Q99ML9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf111Q99ML9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf111Q99ML9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Rnf111Q99ML9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf111Q99ML9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.6■□□□□ 0.57
Rnf111Q99ML9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms