Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdca3Q99M54 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdca3Q99M54 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdca3Q99M54 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.85■□□□□ 0.45
Cdca3Q99M54 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdca3Q99M54 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdca3Q99M54 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdca3Q99M54 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdca3Q99M54 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdca3Q99M54 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdca3Q99M54 Mir6236-201ENSMUST00000184437 123 ntBASIC17.84■□□□□ 0.45
Cdca3Q99M54 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdca3Q99M54 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdca3Q99M54 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdca3Q99M54 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdca3Q99M54 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdca3Q99M54 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdca3Q99M54 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdca3Q99M54 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdca3Q99M54 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdca3Q99M54 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cdca3Q99M54 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Cdca3Q99M54 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdca3Q99M54 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdca3Q99M54 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdca3Q99M54 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.83■□□□□ 0.44
Cdca3Q99M54 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdca3Q99M54 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdca3Q99M54 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cdca3Q99M54 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cdca3Q99M54 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdca3Q99M54 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdca3Q99M54 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdca3Q99M54 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdca3Q99M54 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdca3Q99M54 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdca3Q99M54 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.82■□□□□ 0.44
Cdca3Q99M54 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Cdca3Q99M54 Gm10849-201ENSMUST00000100397 618 ntBASIC17.82■□□□□ 0.44
Cdca3Q99M54 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdca3Q99M54 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdca3Q99M54 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdca3Q99M54 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdca3Q99M54 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdca3Q99M54 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdca3Q99M54 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdca3Q99M54 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cdca3Q99M54 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cdca3Q99M54 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.81■□□□□ 0.44
Cdca3Q99M54 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
Cdca3Q99M54 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
Cdca3Q99M54 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdca3Q99M54 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdca3Q99M54 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdca3Q99M54 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdca3Q99M54 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdca3Q99M54 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdca3Q99M54 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdca3Q99M54 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cdca3Q99M54 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdca3Q99M54 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdca3Q99M54 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdca3Q99M54 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdca3Q99M54 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdca3Q99M54 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdca3Q99M54 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.79■□□□□ 0.44
Cdca3Q99M54 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdca3Q99M54 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Cdca3Q99M54 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.79■□□□□ 0.44
Cdca3Q99M54 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.79■□□□□ 0.44
Cdca3Q99M54 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdca3Q99M54 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cdca3Q99M54 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdca3Q99M54 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdca3Q99M54 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdca3Q99M54 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdca3Q99M54 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdca3Q99M54 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cdca3Q99M54 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdca3Q99M54 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
Cdca3Q99M54 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdca3Q99M54 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cdca3Q99M54 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.78■□□□□ 0.44
Cdca3Q99M54 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdca3Q99M54 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.78■□□□□ 0.44
Cdca3Q99M54 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdca3Q99M54 Gm43530-201ENSMUST00000195920 274 ntBASIC17.78■□□□□ 0.44
Cdca3Q99M54 Gm42778-201ENSMUST00000199644 553 ntBASIC17.78■□□□□ 0.44
Cdca3Q99M54 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cdca3Q99M54 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cdca3Q99M54 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdca3Q99M54 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cdca3Q99M54 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdca3Q99M54 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdca3Q99M54 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdca3Q99M54 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdca3Q99M54 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdca3Q99M54 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdca3Q99M54 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdca3Q99M54 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms