Protein–RNA interactions for Protein: Q99J59

Tspan1, Tetraspanin-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan1Q99J59 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tspan1Q99J59 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tspan1Q99J59 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tspan1Q99J59 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.19■□□□□ 0.66
Tspan1Q99J59 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.19■□□□□ 0.66
Tspan1Q99J59 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.19■□□□□ 0.66
Tspan1Q99J59 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.19■□□□□ 0.66
Tspan1Q99J59 Gm5874-201ENSMUST00000096101 508 ntBASIC19.19■□□□□ 0.66
Tspan1Q99J59 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tspan1Q99J59 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tspan1Q99J59 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tspan1Q99J59 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
Tspan1Q99J59 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tspan1Q99J59 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tspan1Q99J59 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.18■□□□□ 0.66
Tspan1Q99J59 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.18■□□□□ 0.66
Tspan1Q99J59 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tspan1Q99J59 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tspan1Q99J59 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tspan1Q99J59 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.18■□□□□ 0.66
Tspan1Q99J59 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tspan1Q99J59 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tspan1Q99J59 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.18■□□□□ 0.66
Tspan1Q99J59 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tspan1Q99J59 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Tspan1Q99J59 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.18■□□□□ 0.66
Tspan1Q99J59 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.18■□□□□ 0.66
Tspan1Q99J59 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Tspan1Q99J59 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan1Q99J59 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan1Q99J59 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan1Q99J59 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan1Q99J59 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan1Q99J59 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.17■□□□□ 0.66
Tspan1Q99J59 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan1Q99J59 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Tspan1Q99J59 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tspan1Q99J59 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tspan1Q99J59 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan1Q99J59 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan1Q99J59 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan1Q99J59 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan1Q99J59 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.17■□□□□ 0.66
Tspan1Q99J59 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tspan1Q99J59 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Tspan1Q99J59 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tspan1Q99J59 Gm9988-201ENSMUST00000069786 435 ntBASIC19.16■□□□□ 0.66
Tspan1Q99J59 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Tspan1Q99J59 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Tspan1Q99J59 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tspan1Q99J59 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan1Q99J59 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan1Q99J59 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan1Q99J59 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan1Q99J59 Gm42778-201ENSMUST00000199644 553 ntBASIC19.15■□□□□ 0.66
Tspan1Q99J59 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan1Q99J59 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan1Q99J59 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan1Q99J59 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan1Q99J59 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tspan1Q99J59 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan1Q99J59 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tspan1Q99J59 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan1Q99J59 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan1Q99J59 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan1Q99J59 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Tspan1Q99J59 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan1Q99J59 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan1Q99J59 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.14■□□□□ 0.65
Tspan1Q99J59 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan1Q99J59 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan1Q99J59 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan1Q99J59 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan1Q99J59 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.13■□□□□ 0.65
Tspan1Q99J59 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan1Q99J59 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan1Q99J59 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan1Q99J59 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan1Q99J59 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan1Q99J59 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Tspan1Q99J59 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan1Q99J59 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan1Q99J59 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan1Q99J59 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan1Q99J59 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan1Q99J59 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tspan1Q99J59 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tspan1Q99J59 Gm13234-201ENSMUST00000120010 747 ntBASIC19.11■□□□□ 0.65
Tspan1Q99J59 Gm7860-201ENSMUST00000121190 879 ntBASIC19.11■□□□□ 0.65
Tspan1Q99J59 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tspan1Q99J59 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
Tspan1Q99J59 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Tspan1Q99J59 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tspan1Q99J59 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Tspan1Q99J59 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan1Q99J59 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan1Q99J59 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.1■□□□□ 0.65
Tspan1Q99J59 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan1Q99J59 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.1■□□□□ 0.65
Tspan1Q99J59 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms