Protein–RNA interactions for Protein: Q91ZQ5

Rpe65, Retinoid isomerohydrolase, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpe65Q91ZQ5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rpe65Q91ZQ5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpe65Q91ZQ5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpe65Q91ZQ5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpe65Q91ZQ5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpe65Q91ZQ5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rpe65Q91ZQ5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.72■□□□□ 0.59
Rpe65Q91ZQ5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpe65Q91ZQ5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpe65Q91ZQ5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpe65Q91ZQ5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpe65Q91ZQ5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpe65Q91ZQ5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Rpe65Q91ZQ5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpe65Q91ZQ5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpe65Q91ZQ5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpe65Q91ZQ5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpe65Q91ZQ5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpe65Q91ZQ5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.71■□□□□ 0.59
Rpe65Q91ZQ5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.71■□□□□ 0.59
Rpe65Q91ZQ5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.71■□□□□ 0.59
Rpe65Q91ZQ5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpe65Q91ZQ5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpe65Q91ZQ5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpe65Q91ZQ5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rpe65Q91ZQ5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rpe65Q91ZQ5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpe65Q91ZQ5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpe65Q91ZQ5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.7■□□□□ 0.58
Rpe65Q91ZQ5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.7■□□□□ 0.58
Rpe65Q91ZQ5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.7■□□□□ 0.58
Rpe65Q91ZQ5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpe65Q91ZQ5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.7■□□□□ 0.58
Rpe65Q91ZQ5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rpe65Q91ZQ5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpe65Q91ZQ5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Rpe65Q91ZQ5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpe65Q91ZQ5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rpe65Q91ZQ5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpe65Q91ZQ5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpe65Q91ZQ5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Rpe65Q91ZQ5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpe65Q91ZQ5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.69■□□□□ 0.58
Rpe65Q91ZQ5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rpe65Q91ZQ5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpe65Q91ZQ5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpe65Q91ZQ5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpe65Q91ZQ5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpe65Q91ZQ5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpe65Q91ZQ5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpe65Q91ZQ5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpe65Q91ZQ5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rpe65Q91ZQ5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpe65Q91ZQ5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpe65Q91ZQ5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpe65Q91ZQ5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rpe65Q91ZQ5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpe65Q91ZQ5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpe65Q91ZQ5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpe65Q91ZQ5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpe65Q91ZQ5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpe65Q91ZQ5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpe65Q91ZQ5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpe65Q91ZQ5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpe65Q91ZQ5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpe65Q91ZQ5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpe65Q91ZQ5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpe65Q91ZQ5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpe65Q91ZQ5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpe65Q91ZQ5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpe65Q91ZQ5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Rpe65Q91ZQ5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpe65Q91ZQ5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpe65Q91ZQ5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpe65Q91ZQ5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rpe65Q91ZQ5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpe65Q91ZQ5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpe65Q91ZQ5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.65■□□□□ 0.58
Rpe65Q91ZQ5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.65■□□□□ 0.58
Rpe65Q91ZQ5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpe65Q91ZQ5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpe65Q91ZQ5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.64■□□□□ 0.57
Rpe65Q91ZQ5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpe65Q91ZQ5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpe65Q91ZQ5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpe65Q91ZQ5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 131.1 ms