Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha3Q91Y16 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha3Q91Y16 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha3Q91Y16 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha3Q91Y16 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha3Q91Y16 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha3Q91Y16 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha3Q91Y16 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha3Q91Y16 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha3Q91Y16 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha3Q91Y16 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha3Q91Y16 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdha3Q91Y16 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha3Q91Y16 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha3Q91Y16 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha3Q91Y16 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pcdha3Q91Y16 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha3Q91Y16 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha3Q91Y16 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha3Q91Y16 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha3Q91Y16 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdha3Q91Y16 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdha3Q91Y16 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha3Q91Y16 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha3Q91Y16 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Pcdha3Q91Y16 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha3Q91Y16 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha3Q91Y16 Gm40848-201ENSMUST00000221998 324 ntBASIC20.14■□□□□ 0.81
Pcdha3Q91Y16 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha3Q91Y16 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha3Q91Y16 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha3Q91Y16 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha3Q91Y16 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha3Q91Y16 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha3Q91Y16 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pcdha3Q91Y16 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha3Q91Y16 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha3Q91Y16 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pcdha3Q91Y16 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha3Q91Y16 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha3Q91Y16 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha3Q91Y16 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha3Q91Y16 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha3Q91Y16 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pcdha3Q91Y16 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha3Q91Y16 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Pcdha3Q91Y16 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha3Q91Y16 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Pcdha3Q91Y16 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha3Q91Y16 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.11■□□□□ 0.81
Pcdha3Q91Y16 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.11■□□□□ 0.81
Pcdha3Q91Y16 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.11■□□□□ 0.81
Pcdha3Q91Y16 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.11■□□□□ 0.81
Pcdha3Q91Y16 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha3Q91Y16 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Pcdha3Q91Y16 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha3Q91Y16 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha3Q91Y16 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha3Q91Y16 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.1■□□□□ 0.81
Pcdha3Q91Y16 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha3Q91Y16 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha3Q91Y16 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha3Q91Y16 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.1■□□□□ 0.81
Pcdha3Q91Y16 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha3Q91Y16 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha3Q91Y16 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.1■□□□□ 0.81
Pcdha3Q91Y16 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha3Q91Y16 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha3Q91Y16 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdha3Q91Y16 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha3Q91Y16 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha3Q91Y16 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha3Q91Y16 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pcdha3Q91Y16 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha3Q91Y16 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pcdha3Q91Y16 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha3Q91Y16 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha3Q91Y16 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha3Q91Y16 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha3Q91Y16 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha3Q91Y16 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Pcdha3Q91Y16 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha3Q91Y16 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Pcdha3Q91Y16 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha3Q91Y16 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcdha3Q91Y16 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha3Q91Y16 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha3Q91Y16 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha3Q91Y16 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha3Q91Y16 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdha3Q91Y16 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdha3Q91Y16 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdha3Q91Y16 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdha3Q91Y16 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.07■□□□□ 0.8
Pcdha3Q91Y16 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha3Q91Y16 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha3Q91Y16 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha3Q91Y16 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha3Q91Y16 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha3Q91Y16 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms