Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Mir7075-201ENSMUST00000184187 82 ntBASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha8Q91Y12 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha8Q91Y12 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha8Q91Y12 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha8Q91Y12 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha8Q91Y12 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha8Q91Y12 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdha8Q91Y12 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdha8Q91Y12 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdha8Q91Y12 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdha8Q91Y12 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha8Q91Y12 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha8Q91Y12 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha8Q91Y12 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdha8Q91Y12 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha8Q91Y12 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha8Q91Y12 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha8Q91Y12 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha8Q91Y12 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha8Q91Y12 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha8Q91Y12 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha8Q91Y12 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha8Q91Y12 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha8Q91Y12 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha8Q91Y12 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha8Q91Y12 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.7■□□□□ 0.58
Pcdha8Q91Y12 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.7■□□□□ 0.58
Pcdha8Q91Y12 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Pcdha8Q91Y12 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha8Q91Y12 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha8Q91Y12 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdha8Q91Y12 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Pcdha8Q91Y12 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha8Q91Y12 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pcdha8Q91Y12 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pcdha8Q91Y12 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.69■□□□□ 0.58
Pcdha8Q91Y12 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha8Q91Y12 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha8Q91Y12 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha8Q91Y12 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha8Q91Y12 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha8Q91Y12 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha8Q91Y12 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha8Q91Y12 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha8Q91Y12 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha8Q91Y12 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha8Q91Y12 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha8Q91Y12 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.68■□□□□ 0.58
Pcdha8Q91Y12 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.68■□□□□ 0.58
Pcdha8Q91Y12 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha8Q91Y12 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha8Q91Y12 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha8Q91Y12 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Gm8493-201ENSMUST00000196881 489 ntBASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Serp2-204ENSMUST00000228055 705 ntBASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdha8Q91Y12 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Gm45417-201ENSMUST00000209533 758 ntBASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha8Q91Y12 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdha8Q91Y12 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha8Q91Y12 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha8Q91Y12 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdha8Q91Y12 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms