Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha9Q91Y11 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pcdha9Q91Y11 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdha9Q91Y11 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha9Q91Y11 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha9Q91Y11 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.55■□□□□ 0.88
Pcdha9Q91Y11 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha9Q91Y11 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha9Q91Y11 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha9Q91Y11 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha9Q91Y11 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdha9Q91Y11 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha9Q91Y11 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha9Q91Y11 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.54■□□□□ 0.88
Pcdha9Q91Y11 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha9Q91Y11 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Pcdha9Q91Y11 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
Pcdha9Q91Y11 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha9Q91Y11 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha9Q91Y11 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdha9Q91Y11 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdha9Q91Y11 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdha9Q91Y11 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha9Q91Y11 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha9Q91Y11 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha9Q91Y11 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha9Q91Y11 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha9Q91Y11 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha9Q91Y11 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha9Q91Y11 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha9Q91Y11 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha9Q91Y11 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha9Q91Y11 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdha9Q91Y11 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.52■□□□□ 0.88
Pcdha9Q91Y11 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha9Q91Y11 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.52■□□□□ 0.88
Pcdha9Q91Y11 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha9Q91Y11 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha9Q91Y11 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdha9Q91Y11 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha9Q91Y11 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha9Q91Y11 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdha9Q91Y11 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha9Q91Y11 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha9Q91Y11 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Pcdha9Q91Y11 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha9Q91Y11 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdha9Q91Y11 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pcdha9Q91Y11 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha9Q91Y11 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Pcdha9Q91Y11 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha9Q91Y11 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha9Q91Y11 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha9Q91Y11 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdha9Q91Y11 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha9Q91Y11 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha9Q91Y11 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdha9Q91Y11 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdha9Q91Y11 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha9Q91Y11 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pcdha9Q91Y11 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha9Q91Y11 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdha9Q91Y11 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdha9Q91Y11 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha9Q91Y11 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.49■□□□□ 0.87
Pcdha9Q91Y11 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdha9Q91Y11 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha9Q91Y11 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Pcdha9Q91Y11 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha9Q91Y11 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdha9Q91Y11 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha9Q91Y11 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pcdha9Q91Y11 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha9Q91Y11 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha9Q91Y11 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha9Q91Y11 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdha9Q91Y11 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha9Q91Y11 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdha9Q91Y11 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha9Q91Y11 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha9Q91Y11 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha9Q91Y11 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdha9Q91Y11 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdha9Q91Y11 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha9Q91Y11 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha9Q91Y11 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha9Q91Y11 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.47■□□□□ 0.87
Pcdha9Q91Y11 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Pcdha9Q91Y11 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha9Q91Y11 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha9Q91Y11 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha9Q91Y11 Gm15039-201ENSMUST00000118914 875 ntBASIC20.46■□□□□ 0.87
Pcdha9Q91Y11 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.46■□□□□ 0.87
Pcdha9Q91Y11 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.46■□□□□ 0.87
Pcdha9Q91Y11 Golph3-202ENSMUST00000226517 2359 ntBASIC20.46■□□□□ 0.87
Pcdha9Q91Y11 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms