Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb3Q91XZ7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.18■□□□□ 0.66
Pcdhb3Q91XZ7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb3Q91XZ7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb3Q91XZ7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb3Q91XZ7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhb3Q91XZ7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb3Q91XZ7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdhb3Q91XZ7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.18■□□□□ 0.66
Pcdhb3Q91XZ7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb3Q91XZ7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb3Q91XZ7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb3Q91XZ7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb3Q91XZ7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhb3Q91XZ7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb3Q91XZ7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhb3Q91XZ7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhb3Q91XZ7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb3Q91XZ7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb3Q91XZ7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb3Q91XZ7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb3Q91XZ7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb3Q91XZ7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb3Q91XZ7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb3Q91XZ7 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.16■□□□□ 0.66
Pcdhb3Q91XZ7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb3Q91XZ7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb3Q91XZ7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb3Q91XZ7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb3Q91XZ7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb3Q91XZ7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdhb3Q91XZ7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb3Q91XZ7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb3Q91XZ7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb3Q91XZ7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pcdhb3Q91XZ7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb3Q91XZ7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb3Q91XZ7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Pcdhb3Q91XZ7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb3Q91XZ7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Pcdhb3Q91XZ7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Pcdhb3Q91XZ7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdhb3Q91XZ7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdhb3Q91XZ7 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdhb3Q91XZ7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb3Q91XZ7 Gm13241-201ENSMUST00000094493 780 ntBASIC19.14■□□□□ 0.65
Pcdhb3Q91XZ7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb3Q91XZ7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb3Q91XZ7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb3Q91XZ7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb3Q91XZ7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhb3Q91XZ7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb3Q91XZ7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb3Q91XZ7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb3Q91XZ7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb3Q91XZ7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb3Q91XZ7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb3Q91XZ7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb3Q91XZ7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb3Q91XZ7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb3Q91XZ7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb3Q91XZ7 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.13■□□□□ 0.65
Pcdhb3Q91XZ7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb3Q91XZ7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb3Q91XZ7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms