Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Gm12821-201ENSMUST00000120022 600 ntBASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga3Q91XY5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga3Q91XY5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga3Q91XY5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga3Q91XY5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga3Q91XY5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga3Q91XY5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga3Q91XY5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga3Q91XY5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga3Q91XY5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga3Q91XY5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdhga3Q91XY5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga3Q91XY5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga3Q91XY5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga3Q91XY5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga3Q91XY5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga3Q91XY5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga3Q91XY5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga3Q91XY5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga3Q91XY5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Pcdhga3Q91XY5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Spcs1-204ENSMUST00000226782 949 ntBASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga3Q91XY5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga3Q91XY5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga3Q91XY5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga3Q91XY5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga3Q91XY5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga3Q91XY5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga3Q91XY5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.02■□□□□ 0.32
Pcdhga3Q91XY5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga3Q91XY5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.01■□□□□ 0.31
Pcdhga3Q91XY5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms