Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC23.53■■□□□ 1.36
StrcQ8VIM6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
StrcQ8VIM6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
StrcQ8VIM6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
StrcQ8VIM6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
StrcQ8VIM6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC23.52■■□□□ 1.36
StrcQ8VIM6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
StrcQ8VIM6 Gm11643-201ENSMUST00000119578 864 ntBASIC23.52■■□□□ 1.36
StrcQ8VIM6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
StrcQ8VIM6 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.52■■□□□ 1.36
StrcQ8VIM6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
StrcQ8VIM6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
StrcQ8VIM6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
StrcQ8VIM6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
StrcQ8VIM6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
StrcQ8VIM6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
StrcQ8VIM6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
StrcQ8VIM6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
StrcQ8VIM6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
StrcQ8VIM6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
StrcQ8VIM6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
StrcQ8VIM6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
StrcQ8VIM6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
StrcQ8VIM6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
StrcQ8VIM6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
StrcQ8VIM6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC23.49■■□□□ 1.35
StrcQ8VIM6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
StrcQ8VIM6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
StrcQ8VIM6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
StrcQ8VIM6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
StrcQ8VIM6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
StrcQ8VIM6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
StrcQ8VIM6 Mir1199-201ENSMUST00000117015 119 ntBASIC23.48■■□□□ 1.35
StrcQ8VIM6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
StrcQ8VIM6 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.48■■□□□ 1.35
StrcQ8VIM6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
StrcQ8VIM6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.48■■□□□ 1.35
StrcQ8VIM6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
StrcQ8VIM6 Gm2399-201ENSMUST00000104944 225 ntBASIC23.47■■□□□ 1.35
StrcQ8VIM6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC23.47■■□□□ 1.35
StrcQ8VIM6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC23.47■■□□□ 1.35
StrcQ8VIM6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
StrcQ8VIM6 AC153881.2-201ENSMUST00000214877 204 ntBASIC23.47■■□□□ 1.35
StrcQ8VIM6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
StrcQ8VIM6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
StrcQ8VIM6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
StrcQ8VIM6 Mir5122-201ENSMUST00000175004 89 ntBASIC23.47■■□□□ 1.35
StrcQ8VIM6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
StrcQ8VIM6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
StrcQ8VIM6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
StrcQ8VIM6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
StrcQ8VIM6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
StrcQ8VIM6 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.45■■□□□ 1.34
StrcQ8VIM6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC23.45■■□□□ 1.34
StrcQ8VIM6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
StrcQ8VIM6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC23.44■■□□□ 1.34
StrcQ8VIM6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
StrcQ8VIM6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
StrcQ8VIM6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
StrcQ8VIM6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
StrcQ8VIM6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.44■■□□□ 1.34
StrcQ8VIM6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC23.44■■□□□ 1.34
StrcQ8VIM6 AC154649.1-201ENSMUST00000227392 384 ntBASIC23.44■■□□□ 1.34
StrcQ8VIM6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
StrcQ8VIM6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
StrcQ8VIM6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
StrcQ8VIM6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
StrcQ8VIM6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
StrcQ8VIM6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
StrcQ8VIM6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
StrcQ8VIM6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
StrcQ8VIM6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
StrcQ8VIM6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
StrcQ8VIM6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
StrcQ8VIM6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
StrcQ8VIM6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
StrcQ8VIM6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC23.42■■□□□ 1.34
StrcQ8VIM6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
StrcQ8VIM6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
StrcQ8VIM6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
StrcQ8VIM6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
StrcQ8VIM6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
StrcQ8VIM6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC23.41■■□□□ 1.34
StrcQ8VIM6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
StrcQ8VIM6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
StrcQ8VIM6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms