Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vps4aQ8VEJ9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4aQ8VEJ9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Vps4aQ8VEJ9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Vps4aQ8VEJ9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps4aQ8VEJ9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps4aQ8VEJ9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps4aQ8VEJ9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps4aQ8VEJ9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps4aQ8VEJ9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vps4aQ8VEJ9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4aQ8VEJ9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4aQ8VEJ9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4aQ8VEJ9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4aQ8VEJ9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Gm7291-201ENSMUST00000199147 382 ntBASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4aQ8VEJ9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps4aQ8VEJ9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps4aQ8VEJ9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.59■□□□□ 0.57
Vps4aQ8VEJ9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.59■□□□□ 0.57
Vps4aQ8VEJ9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps4aQ8VEJ9 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.59■□□□□ 0.57
Vps4aQ8VEJ9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps4aQ8VEJ9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps4aQ8VEJ9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps4aQ8VEJ9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps4aQ8VEJ9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.59■□□□□ 0.57
Vps4aQ8VEJ9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps4aQ8VEJ9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Vps4aQ8VEJ9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
Vps4aQ8VEJ9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps4aQ8VEJ9 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.58■□□□□ 0.56
Vps4aQ8VEJ9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Vps4aQ8VEJ9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps4aQ8VEJ9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Vps4aQ8VEJ9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps4aQ8VEJ9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps4aQ8VEJ9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Vps4aQ8VEJ9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Vps4aQ8VEJ9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Vps4aQ8VEJ9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4aQ8VEJ9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4aQ8VEJ9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4aQ8VEJ9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4aQ8VEJ9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Vps4aQ8VEJ9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.56■□□□□ 0.56
Vps4aQ8VEJ9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4aQ8VEJ9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4aQ8VEJ9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Vps4aQ8VEJ9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.56■□□□□ 0.56
Vps4aQ8VEJ9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4aQ8VEJ9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.55■□□□□ 0.56
Vps4aQ8VEJ9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.55■□□□□ 0.56
Vps4aQ8VEJ9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Vps4aQ8VEJ9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4aQ8VEJ9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.55■□□□□ 0.56
Vps4aQ8VEJ9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4aQ8VEJ9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4aQ8VEJ9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Vps4aQ8VEJ9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4aQ8VEJ9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4aQ8VEJ9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4aQ8VEJ9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Vps4aQ8VEJ9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4aQ8VEJ9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.54■□□□□ 0.56
Vps4aQ8VEJ9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4aQ8VEJ9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4aQ8VEJ9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4aQ8VEJ9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps4aQ8VEJ9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.53■□□□□ 0.56
Vps4aQ8VEJ9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms