Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vps39Q8R5L3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Vps39Q8R5L3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps39Q8R5L3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps39Q8R5L3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps39Q8R5L3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vps39Q8R5L3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps39Q8R5L3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps39Q8R5L3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps39Q8R5L3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Vps39Q8R5L3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.26■□□□□ 0.67
Vps39Q8R5L3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Vps39Q8R5L3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Vps39Q8R5L3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.25■□□□□ 0.67
Vps39Q8R5L3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps39Q8R5L3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Vps39Q8R5L3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps39Q8R5L3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps39Q8R5L3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.24■□□□□ 0.67
Vps39Q8R5L3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps39Q8R5L3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps39Q8R5L3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Vps39Q8R5L3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps39Q8R5L3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Vps39Q8R5L3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps39Q8R5L3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps39Q8R5L3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps39Q8R5L3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.24■□□□□ 0.67
Vps39Q8R5L3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps39Q8R5L3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps39Q8R5L3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Serp2-204ENSMUST00000228055 705 ntBASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps39Q8R5L3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps39Q8R5L3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps39Q8R5L3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Vps39Q8R5L3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps39Q8R5L3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps39Q8R5L3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps39Q8R5L3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps39Q8R5L3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps39Q8R5L3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps39Q8R5L3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps39Q8R5L3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Vps39Q8R5L3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps39Q8R5L3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Vps39Q8R5L3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps39Q8R5L3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps39Q8R5L3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps39Q8R5L3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps39Q8R5L3 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.2■□□□□ 0.66
Vps39Q8R5L3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.2■□□□□ 0.66
Vps39Q8R5L3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps39Q8R5L3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.2■□□□□ 0.66
Vps39Q8R5L3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps39Q8R5L3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms