Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cuedc1Q8R3V6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cuedc1Q8R3V6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cuedc1Q8R3V6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cuedc1Q8R3V6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cuedc1Q8R3V6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cuedc1Q8R3V6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Cuedc1Q8R3V6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cuedc1Q8R3V6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cuedc1Q8R3V6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cuedc1Q8R3V6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cuedc1Q8R3V6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.39■□□□□ 0.37
Cuedc1Q8R3V6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cuedc1Q8R3V6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.39■□□□□ 0.37
Cuedc1Q8R3V6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Cuedc1Q8R3V6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cuedc1Q8R3V6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cuedc1Q8R3V6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cuedc1Q8R3V6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cuedc1Q8R3V6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cuedc1Q8R3V6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cuedc1Q8R3V6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.36■□□□□ 0.37
Cuedc1Q8R3V6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cuedc1Q8R3V6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cuedc1Q8R3V6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Cuedc1Q8R3V6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cuedc1Q8R3V6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cuedc1Q8R3V6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cuedc1Q8R3V6 Gm20760-201ENSMUST00000179197 648 ntBASIC17.34■□□□□ 0.37
Cuedc1Q8R3V6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.34■□□□□ 0.37
Cuedc1Q8R3V6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms