Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup58Q8R332 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.56■□□□□ 0.88
Nup58Q8R332 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nup58Q8R332 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup58Q8R332 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup58Q8R332 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup58Q8R332 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup58Q8R332 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup58Q8R332 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup58Q8R332 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
Nup58Q8R332 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Nup58Q8R332 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup58Q8R332 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup58Q8R332 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.56■□□□□ 0.88
Nup58Q8R332 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup58Q8R332 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup58Q8R332 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup58Q8R332 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Nup58Q8R332 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Nup58Q8R332 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Nup58Q8R332 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Nup58Q8R332 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup58Q8R332 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup58Q8R332 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup58Q8R332 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.55■□□□□ 0.88
Nup58Q8R332 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nup58Q8R332 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nup58Q8R332 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.55■□□□□ 0.88
Nup58Q8R332 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Nup58Q8R332 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup58Q8R332 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup58Q8R332 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup58Q8R332 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup58Q8R332 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Nup58Q8R332 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup58Q8R332 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup58Q8R332 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup58Q8R332 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nup58Q8R332 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nup58Q8R332 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.54■□□□□ 0.88
Nup58Q8R332 Gm45417-201ENSMUST00000209533 758 ntBASIC20.54■□□□□ 0.88
Nup58Q8R332 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nup58Q8R332 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Nup58Q8R332 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Nup58Q8R332 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup58Q8R332 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup58Q8R332 Golph3-205ENSMUST00000228671 2842 ntBASIC20.54■□□□□ 0.88
Nup58Q8R332 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup58Q8R332 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup58Q8R332 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup58Q8R332 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup58Q8R332 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nup58Q8R332 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup58Q8R332 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nup58Q8R332 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.53■□□□□ 0.88
Nup58Q8R332 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup58Q8R332 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.53■□□□□ 0.88
Nup58Q8R332 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup58Q8R332 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.53■□□□□ 0.88
Nup58Q8R332 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.53■□□□□ 0.88
Nup58Q8R332 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Nup58Q8R332 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nup58Q8R332 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nup58Q8R332 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup58Q8R332 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup58Q8R332 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup58Q8R332 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup58Q8R332 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Nup58Q8R332 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.52■□□□□ 0.88
Nup58Q8R332 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nup58Q8R332 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.52■□□□□ 0.88
Nup58Q8R332 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup58Q8R332 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup58Q8R332 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup58Q8R332 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup58Q8R332 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup58Q8R332 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.52■□□□□ 0.88
Nup58Q8R332 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nup58Q8R332 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nup58Q8R332 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Nup58Q8R332 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup58Q8R332 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.51■□□□□ 0.87
Nup58Q8R332 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.51■□□□□ 0.87
Nup58Q8R332 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup58Q8R332 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nup58Q8R332 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nup58Q8R332 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup58Q8R332 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nup58Q8R332 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup58Q8R332 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.51■□□□□ 0.87
Nup58Q8R332 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.51■□□□□ 0.87
Nup58Q8R332 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup58Q8R332 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Nup58Q8R332 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nup58Q8R332 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup58Q8R332 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup58Q8R332 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nup58Q8R332 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nup58Q8R332 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup58Q8R332 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms