Protein–RNA interactions for Protein: Q8R307

Vps18, Vacuolar protein sorting-associated protein 18 homolog, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps18Q8R307 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps18Q8R307 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps18Q8R307 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Vps18Q8R307 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps18Q8R307 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.03■□□□□ 0.96
Vps18Q8R307 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.03■□□□□ 0.96
Vps18Q8R307 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.03■□□□□ 0.96
Vps18Q8R307 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps18Q8R307 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps18Q8R307 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vps18Q8R307 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps18Q8R307 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps18Q8R307 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps18Q8R307 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps18Q8R307 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps18Q8R307 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps18Q8R307 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps18Q8R307 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.02■□□□□ 0.96
Vps18Q8R307 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Vps18Q8R307 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Vps18Q8R307 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vps18Q8R307 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps18Q8R307 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps18Q8R307 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps18Q8R307 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps18Q8R307 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vps18Q8R307 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.01■□□□□ 0.95
Vps18Q8R307 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps18Q8R307 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps18Q8R307 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Vps18Q8R307 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps18Q8R307 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.01■□□□□ 0.95
Vps18Q8R307 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps18Q8R307 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
Vps18Q8R307 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vps18Q8R307 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps18Q8R307 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps18Q8R307 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vps18Q8R307 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps18Q8R307 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps18Q8R307 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21■□□□□ 0.95
Vps18Q8R307 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps18Q8R307 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vps18Q8R307 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Vps18Q8R307 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Vps18Q8R307 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Vps18Q8R307 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vps18Q8R307 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Vps18Q8R307 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vps18Q8R307 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vps18Q8R307 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.99■□□□□ 0.95
Vps18Q8R307 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Vps18Q8R307 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Vps18Q8R307 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.99■□□□□ 0.95
Vps18Q8R307 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps18Q8R307 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps18Q8R307 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vps18Q8R307 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.99■□□□□ 0.95
Vps18Q8R307 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps18Q8R307 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps18Q8R307 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps18Q8R307 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vps18Q8R307 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps18Q8R307 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps18Q8R307 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps18Q8R307 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps18Q8R307 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Vps18Q8R307 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps18Q8R307 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps18Q8R307 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps18Q8R307 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Vps18Q8R307 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps18Q8R307 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Vps18Q8R307 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.97■□□□□ 0.95
Vps18Q8R307 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps18Q8R307 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps18Q8R307 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps18Q8R307 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Vps18Q8R307 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Vps18Q8R307 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
Vps18Q8R307 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps18Q8R307 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps18Q8R307 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Vps18Q8R307 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps18Q8R307 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Vps18Q8R307 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.96■□□□□ 0.95
Vps18Q8R307 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.96■□□□□ 0.95
Vps18Q8R307 Gm22238-201ENSMUST00000175222 88 ntBASIC20.96■□□□□ 0.95
Vps18Q8R307 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vps18Q8R307 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Vps18Q8R307 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps18Q8R307 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.96■□□□□ 0.95
Vps18Q8R307 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps18Q8R307 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vps18Q8R307 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps18Q8R307 Grk6-206ENSMUST00000224995 2971 ntBASIC20.96■□□□□ 0.95
Vps18Q8R307 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps18Q8R307 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.96■□□□□ 0.95
Vps18Q8R307 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Vps18Q8R307 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms