Protein–RNA interactions for Protein: Q8R2I3

Defb35, Beta-defensin 35, mousemouse

Predictions only

Length 63 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb35Q8R2I3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Defb35Q8R2I3 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.52■□□□□ 0.56
Defb35Q8R2I3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Defb35Q8R2I3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Defb35Q8R2I3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Defb35Q8R2I3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Defb35Q8R2I3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Defb35Q8R2I3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.52■□□□□ 0.55
Defb35Q8R2I3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.51■□□□□ 0.55
Defb35Q8R2I3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Defb35Q8R2I3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Defb35Q8R2I3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.51■□□□□ 0.55
Defb35Q8R2I3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Defb35Q8R2I3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Defb35Q8R2I3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Defb35Q8R2I3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Defb35Q8R2I3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.51■□□□□ 0.55
Defb35Q8R2I3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Defb35Q8R2I3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Defb35Q8R2I3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Defb35Q8R2I3 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.51■□□□□ 0.55
Defb35Q8R2I3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Defb35Q8R2I3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Defb35Q8R2I3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Defb35Q8R2I3 Gm18284-201ENSMUST00000172604 624 ntBASIC18.49■□□□□ 0.55
Defb35Q8R2I3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Defb35Q8R2I3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.49■□□□□ 0.55
Defb35Q8R2I3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb35Q8R2I3 Gm10493-201ENSMUST00000097270 612 ntBASIC18.49■□□□□ 0.55
Defb35Q8R2I3 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.49■□□□□ 0.55
Defb35Q8R2I3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb35Q8R2I3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb35Q8R2I3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb35Q8R2I3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb35Q8R2I3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb35Q8R2I3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Defb35Q8R2I3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Defb35Q8R2I3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.48■□□□□ 0.55
Defb35Q8R2I3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Defb35Q8R2I3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb35Q8R2I3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb35Q8R2I3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.48■□□□□ 0.55
Defb35Q8R2I3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Defb35Q8R2I3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb35Q8R2I3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Defb35Q8R2I3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.47■□□□□ 0.55
Defb35Q8R2I3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb35Q8R2I3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb35Q8R2I3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb35Q8R2I3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb35Q8R2I3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Defb35Q8R2I3 Gm5874-201ENSMUST00000096101 508 ntBASIC18.47■□□□□ 0.55
Defb35Q8R2I3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Defb35Q8R2I3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
Defb35Q8R2I3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Defb35Q8R2I3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Defb35Q8R2I3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Defb35Q8R2I3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Defb35Q8R2I3 Gm9988-201ENSMUST00000069786 435 ntBASIC18.46■□□□□ 0.55
Defb35Q8R2I3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Defb35Q8R2I3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Defb35Q8R2I3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Defb35Q8R2I3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Defb35Q8R2I3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.45■□□□□ 0.54
Defb35Q8R2I3 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Defb35Q8R2I3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Defb35Q8R2I3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms