Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Etf1-202ENSMUST00000180351 108 ntBASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nudcd3Q8R1N4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nudcd3Q8R1N4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nudcd3Q8R1N4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nudcd3Q8R1N4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nudcd3Q8R1N4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nudcd3Q8R1N4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nudcd3Q8R1N4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nudcd3Q8R1N4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nudcd3Q8R1N4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nudcd3Q8R1N4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nudcd3Q8R1N4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nudcd3Q8R1N4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nudcd3Q8R1N4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nudcd3Q8R1N4 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.22■□□□□ 0.67
Nudcd3Q8R1N4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nudcd3Q8R1N4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nudcd3Q8R1N4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Nudcd3Q8R1N4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms