Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.02■□□□□ 0.64
Treml1Q8K558 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.02■□□□□ 0.64
Treml1Q8K558 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Treml1Q8K558 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Treml1Q8K558 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.02■□□□□ 0.64
Treml1Q8K558 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Treml1Q8K558 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Treml1Q8K558 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Treml1Q8K558 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Treml1Q8K558 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Treml1Q8K558 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Treml1Q8K558 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Treml1Q8K558 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Treml1Q8K558 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Treml1Q8K558 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Treml1Q8K558 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Treml1Q8K558 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Treml1Q8K558 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Treml1Q8K558 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19■□□□□ 0.63
Treml1Q8K558 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Treml1Q8K558 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Treml1Q8K558 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Treml1Q8K558 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Treml1Q8K558 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Treml1Q8K558 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Treml1Q8K558 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Treml1Q8K558 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Treml1Q8K558 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Treml1Q8K558 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Treml1Q8K558 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Treml1Q8K558 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Treml1Q8K558 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.99■□□□□ 0.63
Treml1Q8K558 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Treml1Q8K558 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Treml1Q8K558 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Treml1Q8K558 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Treml1Q8K558 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Treml1Q8K558 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Treml1Q8K558 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Treml1Q8K558 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Treml1Q8K558 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
Treml1Q8K558 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Treml1Q8K558 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Treml1Q8K558 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Treml1Q8K558 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.98■□□□□ 0.63
Treml1Q8K558 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Treml1Q8K558 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Treml1Q8K558 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Treml1Q8K558 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Treml1Q8K558 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Treml1Q8K558 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Treml1Q8K558 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Treml1Q8K558 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Treml1Q8K558 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Treml1Q8K558 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Treml1Q8K558 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.97■□□□□ 0.63
Treml1Q8K558 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Treml1Q8K558 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Treml1Q8K558 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Treml1Q8K558 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Treml1Q8K558 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Treml1Q8K558 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Treml1Q8K558 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Treml1Q8K558 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Treml1Q8K558 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Treml1Q8K558 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Treml1Q8K558 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Treml1Q8K558 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Treml1Q8K558 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Treml1Q8K558 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Treml1Q8K558 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Treml1Q8K558 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Treml1Q8K558 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Treml1Q8K558 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Treml1Q8K558 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Treml1Q8K558 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Treml1Q8K558 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Treml1Q8K558 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.95■□□□□ 0.62
Treml1Q8K558 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Treml1Q8K558 Iqck-206ENSMUST00000208658 2891 ntBASIC18.95■□□□□ 0.62
Treml1Q8K558 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Treml1Q8K558 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Treml1Q8K558 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Treml1Q8K558 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.94■□□□□ 0.62
Treml1Q8K558 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Treml1Q8K558 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Treml1Q8K558 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.94■□□□□ 0.62
Treml1Q8K558 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.94■□□□□ 0.62
Treml1Q8K558 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.94■□□□□ 0.62
Treml1Q8K558 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Treml1Q8K558 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Treml1Q8K558 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Treml1Q8K558 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Treml1Q8K558 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Treml1Q8K558 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.93■□□□□ 0.62
Treml1Q8K558 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Treml1Q8K558 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Treml1Q8K558 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Treml1Q8K558 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Treml1Q8K558 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms