Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
Rtn1Q8K0T0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn1Q8K0T0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn1Q8K0T0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Rtn1Q8K0T0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rtn1Q8K0T0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rtn1Q8K0T0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rtn1Q8K0T0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Rtn1Q8K0T0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.29■■□□□ 1.16
Rtn1Q8K0T0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Rtn1Q8K0T0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.29■■□□□ 1.16
Rtn1Q8K0T0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rtn1Q8K0T0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Rtn1Q8K0T0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Rtn1Q8K0T0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
Rtn1Q8K0T0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rtn1Q8K0T0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Rtn1Q8K0T0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rtn1Q8K0T0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rtn1Q8K0T0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rtn1Q8K0T0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rtn1Q8K0T0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rtn1Q8K0T0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rtn1Q8K0T0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rtn1Q8K0T0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn1Q8K0T0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn1Q8K0T0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn1Q8K0T0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn1Q8K0T0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
Rtn1Q8K0T0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.26■■□□□ 1.15
Rtn1Q8K0T0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
Rtn1Q8K0T0 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.26■■□□□ 1.15
Rtn1Q8K0T0 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.26■■□□□ 1.15
Rtn1Q8K0T0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn1Q8K0T0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Rtn1Q8K0T0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtn1Q8K0T0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rtn1Q8K0T0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtn1Q8K0T0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Rtn1Q8K0T0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rtn1Q8K0T0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtn1Q8K0T0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn1Q8K0T0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn1Q8K0T0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn1Q8K0T0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.24■■□□□ 1.15
Rtn1Q8K0T0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.24■■□□□ 1.15
Rtn1Q8K0T0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn1Q8K0T0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn1Q8K0T0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn1Q8K0T0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn1Q8K0T0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn1Q8K0T0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn1Q8K0T0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Rtn1Q8K0T0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.23■■□□□ 1.15
Rtn1Q8K0T0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn1Q8K0T0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn1Q8K0T0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn1Q8K0T0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn1Q8K0T0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Rtn1Q8K0T0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn1Q8K0T0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
Rtn1Q8K0T0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Rtn1Q8K0T0 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.22■■□□□ 1.15
Rtn1Q8K0T0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.22■■□□□ 1.15
Rtn1Q8K0T0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn1Q8K0T0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn1Q8K0T0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn1Q8K0T0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn1Q8K0T0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn1Q8K0T0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.21■■□□□ 1.15
Rtn1Q8K0T0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rtn1Q8K0T0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Rtn1Q8K0T0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtn1Q8K0T0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rtn1Q8K0T0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.21■■□□□ 1.15
Rtn1Q8K0T0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtn1Q8K0T0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtn1Q8K0T0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
Rtn1Q8K0T0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rtn1Q8K0T0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rtn1Q8K0T0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn1Q8K0T0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn1Q8K0T0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.2■■□□□ 1.14
Rtn1Q8K0T0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
Rtn1Q8K0T0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn1Q8K0T0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn1Q8K0T0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn1Q8K0T0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn1Q8K0T0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtn1Q8K0T0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.19■■□□□ 1.14
Rtn1Q8K0T0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Rtn1Q8K0T0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtn1Q8K0T0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.19■■□□□ 1.14
Rtn1Q8K0T0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rtn1Q8K0T0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtn1Q8K0T0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rtn1Q8K0T0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtn1Q8K0T0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rtn1Q8K0T0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rtn1Q8K0T0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms