Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcs1Q8JZK9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcs1Q8JZK9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcs1Q8JZK9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcs1Q8JZK9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcs1Q8JZK9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcs1Q8JZK9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hmgcs1Q8JZK9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Gm9847-201ENSMUST00000052528 599 ntBASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcs1Q8JZK9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcs1Q8JZK9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmgcs1Q8JZK9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hmgcs1Q8JZK9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmgcs1Q8JZK9 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.33■□□□□ 0.53
Hmgcs1Q8JZK9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hmgcs1Q8JZK9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmgcs1Q8JZK9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.33■□□□□ 0.53
Hmgcs1Q8JZK9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmgcs1Q8JZK9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmgcs1Q8JZK9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcs1Q8JZK9 Serp2-204ENSMUST00000228055 705 ntBASIC18.33■□□□□ 0.52
Hmgcs1Q8JZK9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcs1Q8JZK9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcs1Q8JZK9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcs1Q8JZK9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.32■□□□□ 0.52
Hmgcs1Q8JZK9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Hmgcs1Q8JZK9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms