Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.35■□□□□ 0.69
Clip4Q8CI96 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clip4Q8CI96 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.34■□□□□ 0.69
Clip4Q8CI96 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.34■□□□□ 0.69
Clip4Q8CI96 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clip4Q8CI96 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.34■□□□□ 0.69
Clip4Q8CI96 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Clip4Q8CI96 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Clip4Q8CI96 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clip4Q8CI96 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clip4Q8CI96 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clip4Q8CI96 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.33■□□□□ 0.69
Clip4Q8CI96 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clip4Q8CI96 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Clip4Q8CI96 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Clip4Q8CI96 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Clip4Q8CI96 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Clip4Q8CI96 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Clip4Q8CI96 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip4Q8CI96 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip4Q8CI96 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip4Q8CI96 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.33■□□□□ 0.68
Clip4Q8CI96 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Clip4Q8CI96 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Clip4Q8CI96 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip4Q8CI96 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip4Q8CI96 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip4Q8CI96 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip4Q8CI96 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip4Q8CI96 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip4Q8CI96 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip4Q8CI96 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip4Q8CI96 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Clip4Q8CI96 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clip4Q8CI96 Gm43017-201ENSMUST00000198296 752 ntBASIC19.32■□□□□ 0.68
Clip4Q8CI96 Gm43173-201ENSMUST00000202246 593 ntBASIC19.32■□□□□ 0.68
Clip4Q8CI96 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip4Q8CI96 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Clip4Q8CI96 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip4Q8CI96 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.31■□□□□ 0.68
Clip4Q8CI96 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Clip4Q8CI96 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip4Q8CI96 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip4Q8CI96 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip4Q8CI96 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip4Q8CI96 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clip4Q8CI96 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.31■□□□□ 0.68
Clip4Q8CI96 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip4Q8CI96 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip4Q8CI96 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip4Q8CI96 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip4Q8CI96 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip4Q8CI96 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.3■□□□□ 0.68
Clip4Q8CI96 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.3■□□□□ 0.68
Clip4Q8CI96 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clip4Q8CI96 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip4Q8CI96 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clip4Q8CI96 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.29■□□□□ 0.68
Clip4Q8CI96 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Clip4Q8CI96 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.28■□□□□ 0.68
Clip4Q8CI96 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip4Q8CI96 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clip4Q8CI96 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip4Q8CI96 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip4Q8CI96 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip4Q8CI96 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms