Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Sox30Q8CGW4 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.2■□□□□ 0.98
Sox30Q8CGW4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sox30Q8CGW4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox30Q8CGW4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox30Q8CGW4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Sox30Q8CGW4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox30Q8CGW4 Gm9959-201ENSMUST00000068277 390 ntBASIC21.19■□□□□ 0.98
Sox30Q8CGW4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox30Q8CGW4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox30Q8CGW4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox30Q8CGW4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.19■□□□□ 0.98
Sox30Q8CGW4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Sox30Q8CGW4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox30Q8CGW4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox30Q8CGW4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox30Q8CGW4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.18■□□□□ 0.98
Sox30Q8CGW4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.18■□□□□ 0.98
Sox30Q8CGW4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox30Q8CGW4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox30Q8CGW4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.18■□□□□ 0.98
Sox30Q8CGW4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox30Q8CGW4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sox30Q8CGW4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox30Q8CGW4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox30Q8CGW4 Gm15546-201ENSMUST00000122095 826 ntBASIC21.17■□□□□ 0.98
Sox30Q8CGW4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox30Q8CGW4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Sox30Q8CGW4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox30Q8CGW4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox30Q8CGW4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox30Q8CGW4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox30Q8CGW4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.16■□□□□ 0.98
Sox30Q8CGW4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox30Q8CGW4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox30Q8CGW4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox30Q8CGW4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox30Q8CGW4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox30Q8CGW4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox30Q8CGW4 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.15■□□□□ 0.98
Sox30Q8CGW4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sox30Q8CGW4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.15■□□□□ 0.98
Sox30Q8CGW4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Sox30Q8CGW4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Sox30Q8CGW4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Sox30Q8CGW4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sox30Q8CGW4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox30Q8CGW4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.15■□□□□ 0.98
Sox30Q8CGW4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox30Q8CGW4 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.15■□□□□ 0.98
Sox30Q8CGW4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Sox30Q8CGW4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sox30Q8CGW4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sox30Q8CGW4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sox30Q8CGW4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sox30Q8CGW4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Sox30Q8CGW4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sox30Q8CGW4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox30Q8CGW4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox30Q8CGW4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox30Q8CGW4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.13■□□□□ 0.97
Sox30Q8CGW4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sox30Q8CGW4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Sox30Q8CGW4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sox30Q8CGW4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox30Q8CGW4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Sox30Q8CGW4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Sox30Q8CGW4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox30Q8CGW4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sox30Q8CGW4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox30Q8CGW4 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.11■□□□□ 0.97
Sox30Q8CGW4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.11■□□□□ 0.97
Sox30Q8CGW4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox30Q8CGW4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox30Q8CGW4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox30Q8CGW4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox30Q8CGW4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox30Q8CGW4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox30Q8CGW4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.1■□□□□ 0.97
Sox30Q8CGW4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox30Q8CGW4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox30Q8CGW4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sox30Q8CGW4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox30Q8CGW4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms