Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco1Q8CEZ1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco1Q8CEZ1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smco1Q8CEZ1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco1Q8CEZ1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smco1Q8CEZ1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco1Q8CEZ1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco1Q8CEZ1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smco1Q8CEZ1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco1Q8CEZ1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco1Q8CEZ1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco1Q8CEZ1 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.58■□□□□ 0.41
Smco1Q8CEZ1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smco1Q8CEZ1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smco1Q8CEZ1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smco1Q8CEZ1 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.58■□□□□ 0.41
Smco1Q8CEZ1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smco1Q8CEZ1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smco1Q8CEZ1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smco1Q8CEZ1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smco1Q8CEZ1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Smco1Q8CEZ1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.58■□□□□ 0.4
Smco1Q8CEZ1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.58■□□□□ 0.4
Smco1Q8CEZ1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.58■□□□□ 0.4
Smco1Q8CEZ1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smco1Q8CEZ1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smco1Q8CEZ1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smco1Q8CEZ1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smco1Q8CEZ1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Smco1Q8CEZ1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Smco1Q8CEZ1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Mir6236-201ENSMUST00000184437 123 ntBASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco1Q8CEZ1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Gm14523-201ENSMUST00000117260 558 ntBASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smco1Q8CEZ1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smco1Q8CEZ1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.54■□□□□ 0.4
Smco1Q8CEZ1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms