Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Pabpn1Q8CCS6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pabpn1Q8CCS6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pabpn1Q8CCS6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pabpn1Q8CCS6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pabpn1Q8CCS6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Pabpn1Q8CCS6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Pabpn1Q8CCS6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pabpn1Q8CCS6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pabpn1Q8CCS6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pabpn1Q8CCS6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pabpn1Q8CCS6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC30.53■■■□□ 2.48
Pabpn1Q8CCS6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
Pabpn1Q8CCS6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Pabpn1Q8CCS6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Pabpn1Q8CCS6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Pabpn1Q8CCS6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Pabpn1Q8CCS6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Pabpn1Q8CCS6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
Pabpn1Q8CCS6 Gm6345-202ENSMUST00000180900 204 ntBASIC30.52■■■□□ 2.48
Pabpn1Q8CCS6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Pabpn1Q8CCS6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
Pabpn1Q8CCS6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC30.51■■■□□ 2.47
Pabpn1Q8CCS6 Gm11539-201ENSMUST00000119837 557 ntBASIC30.51■■■□□ 2.47
Pabpn1Q8CCS6 Gm13436-201ENSMUST00000120418 567 ntBASIC30.51■■■□□ 2.47
Pabpn1Q8CCS6 Gm15847-201ENSMUST00000121417 1065 ntBASIC30.51■■■□□ 2.47
Pabpn1Q8CCS6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC30.51■■■□□ 2.47
Pabpn1Q8CCS6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
Pabpn1Q8CCS6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC30.5■■■□□ 2.47
Pabpn1Q8CCS6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Pabpn1Q8CCS6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Pabpn1Q8CCS6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Pabpn1Q8CCS6 Gm7889-201ENSMUST00000185591 958 ntBASIC30.49■■■□□ 2.47
Pabpn1Q8CCS6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
Pabpn1Q8CCS6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Pabpn1Q8CCS6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Pabpn1Q8CCS6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Pabpn1Q8CCS6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Pabpn1Q8CCS6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Pabpn1Q8CCS6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pabpn1Q8CCS6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Pabpn1Q8CCS6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pabpn1Q8CCS6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pabpn1Q8CCS6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
Pabpn1Q8CCS6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Pabpn1Q8CCS6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pabpn1Q8CCS6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC30.48■■■□□ 2.47
Pabpn1Q8CCS6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pabpn1Q8CCS6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pabpn1Q8CCS6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pabpn1Q8CCS6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pabpn1Q8CCS6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Pabpn1Q8CCS6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC30.47■■■□□ 2.47
Pabpn1Q8CCS6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pabpn1Q8CCS6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pabpn1Q8CCS6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pabpn1Q8CCS6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pabpn1Q8CCS6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC30.46■■■□□ 2.47
Pabpn1Q8CCS6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Pabpn1Q8CCS6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Pabpn1Q8CCS6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Pabpn1Q8CCS6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.46
Pabpn1Q8CCS6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC30.44■■■□□ 2.46
Pabpn1Q8CCS6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
Pabpn1Q8CCS6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC30.44■■■□□ 2.46
Pabpn1Q8CCS6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Pabpn1Q8CCS6 Gm5913-201ENSMUST00000119397 1399 ntBASIC30.43■■■□□ 2.46
Pabpn1Q8CCS6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC30.43■■■□□ 2.46
Pabpn1Q8CCS6 Arhgef4-208ENSMUST00000211073 171 ntBASIC30.43■■■□□ 2.46
Pabpn1Q8CCS6 Gm5867-201ENSMUST00000063197 592 ntBASIC30.43■■■□□ 2.46
Pabpn1Q8CCS6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC30.43■■■□□ 2.46
Pabpn1Q8CCS6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
Pabpn1Q8CCS6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Pabpn1Q8CCS6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC30.42■■■□□ 2.46
Pabpn1Q8CCS6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
Pabpn1Q8CCS6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Pabpn1Q8CCS6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC30.42■■■□□ 2.46
Pabpn1Q8CCS6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC30.42■■■□□ 2.46
Pabpn1Q8CCS6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Pabpn1Q8CCS6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Pabpn1Q8CCS6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC30.42■■■□□ 2.46
Pabpn1Q8CCS6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
Pabpn1Q8CCS6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Pabpn1Q8CCS6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Pabpn1Q8CCS6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC30.41■■■□□ 2.46
Pabpn1Q8CCS6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Pabpn1Q8CCS6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Pabpn1Q8CCS6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Pabpn1Q8CCS6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Pabpn1Q8CCS6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Pabpn1Q8CCS6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Pabpn1Q8CCS6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Pabpn1Q8CCS6 AA414768-201ENSMUST00000121924 1257 ntBASIC30.4■■■□□ 2.46
Pabpn1Q8CCS6 Gm7461-201ENSMUST00000058918 827 ntBASIC30.4■■■□□ 2.46
Pabpn1Q8CCS6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Pabpn1Q8CCS6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC30.4■■■□□ 2.46
Pabpn1Q8CCS6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Pabpn1Q8CCS6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Pabpn1Q8CCS6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
Pabpn1Q8CCS6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms