Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 AL672049.1-201ENSMUST00000197943 91 ntBASIC22.19■■□□□ 1.14
Rtp1Q8C8C1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtp1Q8C8C1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtp1Q8C8C1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtp1Q8C8C1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtp1Q8C8C1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtp1Q8C8C1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtp1Q8C8C1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
Rtp1Q8C8C1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.18■■□□□ 1.14
Rtp1Q8C8C1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtp1Q8C8C1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rtp1Q8C8C1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Rtp1Q8C8C1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtp1Q8C8C1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtp1Q8C8C1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtp1Q8C8C1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtp1Q8C8C1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.17■■□□□ 1.14
Rtp1Q8C8C1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtp1Q8C8C1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtp1Q8C8C1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtp1Q8C8C1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtp1Q8C8C1 Gm5643-201ENSMUST00000117081 966 ntBASIC22.16■■□□□ 1.14
Rtp1Q8C8C1 Gm715-201ENSMUST00000117865 831 ntBASIC22.16■■□□□ 1.14
Rtp1Q8C8C1 Gm12896-201ENSMUST00000118430 226 ntBASIC22.16■■□□□ 1.14
Rtp1Q8C8C1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtp1Q8C8C1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtp1Q8C8C1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtp1Q8C8C1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtp1Q8C8C1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
Rtp1Q8C8C1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.15■■□□□ 1.14
Rtp1Q8C8C1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC22.15■■□□□ 1.14
Rtp1Q8C8C1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtp1Q8C8C1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Rtp1Q8C8C1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtp1Q8C8C1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtp1Q8C8C1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.15■■□□□ 1.14
Rtp1Q8C8C1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtp1Q8C8C1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtp1Q8C8C1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtp1Q8C8C1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rtp1Q8C8C1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Rtp1Q8C8C1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rtp1Q8C8C1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.14■■□□□ 1.13
Rtp1Q8C8C1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC22.14■■□□□ 1.13
Rtp1Q8C8C1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC22.14■■□□□ 1.13
Rtp1Q8C8C1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rtp1Q8C8C1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rtp1Q8C8C1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Rtp1Q8C8C1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtp1Q8C8C1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rtp1Q8C8C1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtp1Q8C8C1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtp1Q8C8C1 Gm37563-201ENSMUST00000192580 1513 ntBASIC22.13■■□□□ 1.13
Rtp1Q8C8C1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtp1Q8C8C1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtp1Q8C8C1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Rtp1Q8C8C1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Rtp1Q8C8C1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtp1Q8C8C1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtp1Q8C8C1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Rtp1Q8C8C1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtp1Q8C8C1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtp1Q8C8C1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.11■■□□□ 1.13
Rtp1Q8C8C1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rtp1Q8C8C1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rtp1Q8C8C1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.1■■□□□ 1.13
Rtp1Q8C8C1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rtp1Q8C8C1 Gm15565-201ENSMUST00000118890 427 ntBASIC22.1■■□□□ 1.13
Rtp1Q8C8C1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC22.1■■□□□ 1.13
Rtp1Q8C8C1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Rtp1Q8C8C1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rtp1Q8C8C1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rtp1Q8C8C1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rtp1Q8C8C1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms