Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Rps24-207ENSMUST00000224568 714 ntBASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Grk6-206ENSMUST00000224995 2971 ntBASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tsen54Q8C2A2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Tsen54Q8C2A2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tsen54Q8C2A2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tsen54Q8C2A2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tsen54Q8C2A2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tsen54Q8C2A2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tsen54Q8C2A2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tsen54Q8C2A2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tsen54Q8C2A2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tsen54Q8C2A2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tsen54Q8C2A2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tsen54Q8C2A2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tsen54Q8C2A2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tsen54Q8C2A2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tsen54Q8C2A2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tsen54Q8C2A2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tsen54Q8C2A2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tsen54Q8C2A2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.07■□□□□ 0.16
Tsen54Q8C2A2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tsen54Q8C2A2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tsen54Q8C2A2 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.07■□□□□ 0.16
Tsen54Q8C2A2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Tsen54Q8C2A2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Gm45102-201ENSMUST00000207427 857 ntBASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Gm9959-201ENSMUST00000068277 390 ntBASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tsen54Q8C2A2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tsen54Q8C2A2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tsen54Q8C2A2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tsen54Q8C2A2 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.05■□□□□ 0.16
Tsen54Q8C2A2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tsen54Q8C2A2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
Tsen54Q8C2A2 Etf1-202ENSMUST00000180351 108 ntBASIC16.05■□□□□ 0.16
Tsen54Q8C2A2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.05■□□□□ 0.16
Tsen54Q8C2A2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tsen54Q8C2A2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tsen54Q8C2A2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tsen54Q8C2A2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tsen54Q8C2A2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.05■□□□□ 0.16
Tsen54Q8C2A2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Gm40881-201ENSMUST00000223397 166 ntBASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tsen54Q8C2A2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tsen54Q8C2A2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.03■□□□□ 0.16
Tsen54Q8C2A2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Tsen54Q8C2A2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tsen54Q8C2A2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Tsen54Q8C2A2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tsen54Q8C2A2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tsen54Q8C2A2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tsen54Q8C2A2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.03■□□□□ 0.16
Tsen54Q8C2A2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tsen54Q8C2A2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.03■□□□□ 0.16
Tsen54Q8C2A2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tsen54Q8C2A2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tsen54Q8C2A2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tsen54Q8C2A2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tsen54Q8C2A2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tsen54Q8C2A2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tsen54Q8C2A2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tsen54Q8C2A2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tsen54Q8C2A2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms