Protein–RNA interactions for Protein: Q8C0J2

Atg16l1, Autophagy-related protein 16-1, mousemouse

Predictions only

Length 607 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg16l1Q8C0J2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Atg16l1Q8C0J2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Atg16l1Q8C0J2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 BC021767-201ENSMUST00000126387 1716 ntBASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atg16l1Q8C0J2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg16l1Q8C0J2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Gm9870-201ENSMUST00000063874 645 ntBASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg16l1Q8C0J2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.16■□□□□ 0.66
Atg16l1Q8C0J2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg16l1Q8C0J2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg16l1Q8C0J2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg16l1Q8C0J2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg16l1Q8C0J2 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms