Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.88■□□□□ 0.29
Trank1Q8BV79 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.88■□□□□ 0.29
Trank1Q8BV79 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trank1Q8BV79 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trank1Q8BV79 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trank1Q8BV79 Gm10819-201ENSMUST00000099988 561 ntBASIC16.87■□□□□ 0.29
Trank1Q8BV79 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trank1Q8BV79 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trank1Q8BV79 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trank1Q8BV79 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trank1Q8BV79 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.87■□□□□ 0.29
Trank1Q8BV79 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trank1Q8BV79 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.87■□□□□ 0.29
Trank1Q8BV79 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Trank1Q8BV79 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trank1Q8BV79 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trank1Q8BV79 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trank1Q8BV79 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trank1Q8BV79 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trank1Q8BV79 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trank1Q8BV79 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trank1Q8BV79 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trank1Q8BV79 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trank1Q8BV79 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trank1Q8BV79 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.85■□□□□ 0.29
Trank1Q8BV79 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trank1Q8BV79 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.85■□□□□ 0.29
Trank1Q8BV79 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trank1Q8BV79 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.85■□□□□ 0.29
Trank1Q8BV79 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trank1Q8BV79 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trank1Q8BV79 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trank1Q8BV79 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trank1Q8BV79 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.85■□□□□ 0.29
Trank1Q8BV79 Rab3c-203ENSMUST00000224180 967 ntBASIC16.85■□□□□ 0.29
Trank1Q8BV79 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.84■□□□□ 0.29
Trank1Q8BV79 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.84■□□□□ 0.29
Trank1Q8BV79 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trank1Q8BV79 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trank1Q8BV79 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trank1Q8BV79 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trank1Q8BV79 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trank1Q8BV79 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trank1Q8BV79 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trank1Q8BV79 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trank1Q8BV79 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trank1Q8BV79 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.83■□□□□ 0.28
Trank1Q8BV79 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trank1Q8BV79 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trank1Q8BV79 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trank1Q8BV79 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trank1Q8BV79 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trank1Q8BV79 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trank1Q8BV79 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.83■□□□□ 0.28
Trank1Q8BV79 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trank1Q8BV79 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trank1Q8BV79 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trank1Q8BV79 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trank1Q8BV79 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.82■□□□□ 0.28
Trank1Q8BV79 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trank1Q8BV79 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trank1Q8BV79 Gm12896-201ENSMUST00000118430 226 ntBASIC16.82■□□□□ 0.28
Trank1Q8BV79 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trank1Q8BV79 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trank1Q8BV79 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trank1Q8BV79 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.81■□□□□ 0.28
Trank1Q8BV79 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trank1Q8BV79 Gm37055-201ENSMUST00000191866 133 ntBASIC16.81■□□□□ 0.28
Trank1Q8BV79 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trank1Q8BV79 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trank1Q8BV79 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trank1Q8BV79 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Trank1Q8BV79 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.8■□□□□ 0.28
Trank1Q8BV79 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trank1Q8BV79 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trank1Q8BV79 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.8■□□□□ 0.28
Trank1Q8BV79 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trank1Q8BV79 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trank1Q8BV79 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.8■□□□□ 0.28
Trank1Q8BV79 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trank1Q8BV79 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.8■□□□□ 0.28
Trank1Q8BV79 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trank1Q8BV79 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trank1Q8BV79 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trank1Q8BV79 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trank1Q8BV79 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trank1Q8BV79 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.8■□□□□ 0.28
Trank1Q8BV79 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trank1Q8BV79 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trank1Q8BV79 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trank1Q8BV79 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trank1Q8BV79 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms