Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lig4Q8BTF7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lig4Q8BTF7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Lig4Q8BTF7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lig4Q8BTF7 Gm13234-201ENSMUST00000120010 747 ntBASIC20.43■□□□□ 0.86
Lig4Q8BTF7 Gm26571-201ENSMUST00000181399 666 ntBASIC20.43■□□□□ 0.86
Lig4Q8BTF7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.43■□□□□ 0.86
Lig4Q8BTF7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lig4Q8BTF7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lig4Q8BTF7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lig4Q8BTF7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lig4Q8BTF7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lig4Q8BTF7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.42■□□□□ 0.86
Lig4Q8BTF7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Lig4Q8BTF7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lig4Q8BTF7 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.42■□□□□ 0.86
Lig4Q8BTF7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Lig4Q8BTF7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lig4Q8BTF7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Lig4Q8BTF7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.42■□□□□ 0.86
Lig4Q8BTF7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lig4Q8BTF7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lig4Q8BTF7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.41■□□□□ 0.86
Lig4Q8BTF7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.41■□□□□ 0.86
Lig4Q8BTF7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Lig4Q8BTF7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lig4Q8BTF7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lig4Q8BTF7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lig4Q8BTF7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lig4Q8BTF7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lig4Q8BTF7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lig4Q8BTF7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lig4Q8BTF7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lig4Q8BTF7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lig4Q8BTF7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lig4Q8BTF7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Lig4Q8BTF7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.4■□□□□ 0.86
Lig4Q8BTF7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.4■□□□□ 0.86
Lig4Q8BTF7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lig4Q8BTF7 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.39■□□□□ 0.86
Lig4Q8BTF7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lig4Q8BTF7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Lig4Q8BTF7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lig4Q8BTF7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lig4Q8BTF7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.39■□□□□ 0.85
Lig4Q8BTF7 AV356131-201ENSMUST00000206201 750 ntBASIC20.39■□□□□ 0.85
Lig4Q8BTF7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Lig4Q8BTF7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lig4Q8BTF7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lig4Q8BTF7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lig4Q8BTF7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.38■□□□□ 0.85
Lig4Q8BTF7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Lig4Q8BTF7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lig4Q8BTF7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lig4Q8BTF7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
Lig4Q8BTF7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lig4Q8BTF7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lig4Q8BTF7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lig4Q8BTF7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lig4Q8BTF7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Lig4Q8BTF7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lig4Q8BTF7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Lig4Q8BTF7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lig4Q8BTF7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lig4Q8BTF7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Lig4Q8BTF7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lig4Q8BTF7 Gm10849-201ENSMUST00000100397 618 ntBASIC20.37■□□□□ 0.85
Lig4Q8BTF7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.37■□□□□ 0.85
Lig4Q8BTF7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.37■□□□□ 0.85
Lig4Q8BTF7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lig4Q8BTF7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.37■□□□□ 0.85
Lig4Q8BTF7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.37■□□□□ 0.85
Lig4Q8BTF7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lig4Q8BTF7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
Lig4Q8BTF7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.36■□□□□ 0.85
Lig4Q8BTF7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lig4Q8BTF7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lig4Q8BTF7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.36■□□□□ 0.85
Lig4Q8BTF7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lig4Q8BTF7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Lig4Q8BTF7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Lig4Q8BTF7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lig4Q8BTF7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lig4Q8BTF7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lig4Q8BTF7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Lig4Q8BTF7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lig4Q8BTF7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.35■□□□□ 0.85
Lig4Q8BTF7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lig4Q8BTF7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lig4Q8BTF7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Lig4Q8BTF7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Lig4Q8BTF7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Lig4Q8BTF7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lig4Q8BTF7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lig4Q8BTF7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lig4Q8BTF7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lig4Q8BTF7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.34■□□□□ 0.85
Lig4Q8BTF7 Gm27405-201ENSMUST00000184201 112 ntBASIC20.34■□□□□ 0.85
Lig4Q8BTF7 Gm38205-201ENSMUST00000192243 258 ntBASIC20.34■□□□□ 0.85
Lig4Q8BTF7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms