Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne4Q8BLR2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne4Q8BLR2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne4Q8BLR2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne4Q8BLR2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Cpne4Q8BLR2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.25■□□□□ 0.35
Cpne4Q8BLR2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne4Q8BLR2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne4Q8BLR2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne4Q8BLR2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne4Q8BLR2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cpne4Q8BLR2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne4Q8BLR2 Gm18284-201ENSMUST00000172604 624 ntBASIC17.24■□□□□ 0.35
Cpne4Q8BLR2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.24■□□□□ 0.35
Cpne4Q8BLR2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne4Q8BLR2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne4Q8BLR2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 Gm10493-201ENSMUST00000097270 612 ntBASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne4Q8BLR2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cpne4Q8BLR2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne4Q8BLR2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cpne4Q8BLR2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne4Q8BLR2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.22■□□□□ 0.35
Cpne4Q8BLR2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.22■□□□□ 0.35
Cpne4Q8BLR2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne4Q8BLR2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne4Q8BLR2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne4Q8BLR2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne4Q8BLR2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cpne4Q8BLR2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne4Q8BLR2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne4Q8BLR2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne4Q8BLR2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne4Q8BLR2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Cpne4Q8BLR2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne4Q8BLR2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.21■□□□□ 0.35
Cpne4Q8BLR2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne4Q8BLR2 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.21■□□□□ 0.35
Cpne4Q8BLR2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.21■□□□□ 0.35
Cpne4Q8BLR2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne4Q8BLR2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne4Q8BLR2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Cpne4Q8BLR2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne4Q8BLR2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne4Q8BLR2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cpne4Q8BLR2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Cpne4Q8BLR2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Cpne4Q8BLR2 Gm5874-201ENSMUST00000096101 508 ntBASIC17.2■□□□□ 0.34
Cpne4Q8BLR2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne4Q8BLR2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne4Q8BLR2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne4Q8BLR2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne4Q8BLR2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne4Q8BLR2 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.2■□□□□ 0.34
Cpne4Q8BLR2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne4Q8BLR2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne4Q8BLR2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne4Q8BLR2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne4Q8BLR2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne4Q8BLR2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.19■□□□□ 0.34
Cpne4Q8BLR2 Gm8495-201ENSMUST00000188740 694 ntBASIC17.19■□□□□ 0.34
Cpne4Q8BLR2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne4Q8BLR2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne4Q8BLR2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne4Q8BLR2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Cpne4Q8BLR2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cpne4Q8BLR2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms