Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdhr3Q8BL00 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cdhr3Q8BL00 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdhr3Q8BL00 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.79■□□□□ 0.28
Cdhr3Q8BL00 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.79■□□□□ 0.28
Cdhr3Q8BL00 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.79■□□□□ 0.28
Cdhr3Q8BL00 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdhr3Q8BL00 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdhr3Q8BL00 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdhr3Q8BL00 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdhr3Q8BL00 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdhr3Q8BL00 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdhr3Q8BL00 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdhr3Q8BL00 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdhr3Q8BL00 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Cdhr3Q8BL00 BC021767-201ENSMUST00000126387 1716 ntBASIC16.77■□□□□ 0.28
Cdhr3Q8BL00 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.77■□□□□ 0.28
Cdhr3Q8BL00 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.77■□□□□ 0.28
Cdhr3Q8BL00 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdhr3Q8BL00 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdhr3Q8BL00 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdhr3Q8BL00 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdhr3Q8BL00 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
Cdhr3Q8BL00 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr3Q8BL00 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr3Q8BL00 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr3Q8BL00 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr3Q8BL00 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr3Q8BL00 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr3Q8BL00 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr3Q8BL00 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr3Q8BL00 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr3Q8BL00 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr3Q8BL00 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdhr3Q8BL00 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cdhr3Q8BL00 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr3Q8BL00 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr3Q8BL00 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr3Q8BL00 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Cdhr3Q8BL00 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.75■□□□□ 0.27
Cdhr3Q8BL00 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cdhr3Q8BL00 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr3Q8BL00 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdhr3Q8BL00 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Cdhr3Q8BL00 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms