Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chmp2bQ8BJF9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
Chmp2bQ8BJF9 Gm14117-201ENSMUST00000122417 843 ntBASIC19.65■□□□□ 0.74
Chmp2bQ8BJF9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Chmp2bQ8BJF9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Chmp2bQ8BJF9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp2bQ8BJF9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp2bQ8BJF9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Chmp2bQ8BJF9 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.65■□□□□ 0.74
Chmp2bQ8BJF9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.64■□□□□ 0.74
Chmp2bQ8BJF9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp2bQ8BJF9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.64■□□□□ 0.73
Chmp2bQ8BJF9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.64■□□□□ 0.73
Chmp2bQ8BJF9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp2bQ8BJF9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
Chmp2bQ8BJF9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Chmp2bQ8BJF9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Chmp2bQ8BJF9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp2bQ8BJF9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Chmp2bQ8BJF9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.63■□□□□ 0.73
Chmp2bQ8BJF9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2bQ8BJF9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2bQ8BJF9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.63■□□□□ 0.73
Chmp2bQ8BJF9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.63■□□□□ 0.73
Chmp2bQ8BJF9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2bQ8BJF9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2bQ8BJF9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2bQ8BJF9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2bQ8BJF9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Chmp2bQ8BJF9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2bQ8BJF9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp2bQ8BJF9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Chmp2bQ8BJF9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp2bQ8BJF9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Gm45102-201ENSMUST00000207427 857 ntBASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Chmp2bQ8BJF9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Rps24-207ENSMUST00000224568 714 ntBASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms