Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smndc1Q8BGT7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.61■□□□□ 0.57
Smndc1Q8BGT7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smndc1Q8BGT7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smndc1Q8BGT7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smndc1Q8BGT7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smndc1Q8BGT7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.61■□□□□ 0.57
Smndc1Q8BGT7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smndc1Q8BGT7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smndc1Q8BGT7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.61■□□□□ 0.57
Smndc1Q8BGT7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.61■□□□□ 0.57
Smndc1Q8BGT7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smndc1Q8BGT7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smndc1Q8BGT7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smndc1Q8BGT7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smndc1Q8BGT7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smndc1Q8BGT7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Smndc1Q8BGT7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smndc1Q8BGT7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smndc1Q8BGT7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Smndc1Q8BGT7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Smndc1Q8BGT7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Smndc1Q8BGT7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smndc1Q8BGT7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smndc1Q8BGT7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smndc1Q8BGT7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smndc1Q8BGT7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smndc1Q8BGT7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smndc1Q8BGT7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Smndc1Q8BGT7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Smndc1Q8BGT7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smndc1Q8BGT7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smndc1Q8BGT7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Smndc1Q8BGT7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
Smndc1Q8BGT7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smndc1Q8BGT7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smndc1Q8BGT7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smndc1Q8BGT7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.57■□□□□ 0.56
Smndc1Q8BGT7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.57■□□□□ 0.56
Smndc1Q8BGT7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smndc1Q8BGT7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.57■□□□□ 0.56
Smndc1Q8BGT7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smndc1Q8BGT7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.56■□□□□ 0.56
Smndc1Q8BGT7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smndc1Q8BGT7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smndc1Q8BGT7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Smndc1Q8BGT7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smndc1Q8BGT7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Smndc1Q8BGT7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smndc1Q8BGT7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smndc1Q8BGT7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smndc1Q8BGT7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smndc1Q8BGT7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smndc1Q8BGT7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smndc1Q8BGT7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.55■□□□□ 0.56
Smndc1Q8BGT7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smndc1Q8BGT7 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Gm15039-201ENSMUST00000118914 875 ntBASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Smndc1Q8BGT7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms