Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Dio3-201ENSMUST00000097228 1449 ntBASIC21.99■■□□□ 1.11
Trnp1Q80ZI1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trnp1Q80ZI1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trnp1Q80ZI1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trnp1Q80ZI1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trnp1Q80ZI1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trnp1Q80ZI1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trnp1Q80ZI1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.99■■□□□ 1.11
Trnp1Q80ZI1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.99■■□□□ 1.11
Trnp1Q80ZI1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trnp1Q80ZI1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trnp1Q80ZI1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.97■■□□□ 1.11
Trnp1Q80ZI1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Trnp1Q80ZI1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
Trnp1Q80ZI1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.97■■□□□ 1.11
Trnp1Q80ZI1 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.97■■□□□ 1.11
Trnp1Q80ZI1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trnp1Q80ZI1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trnp1Q80ZI1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trnp1Q80ZI1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trnp1Q80ZI1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.97■■□□□ 1.11
Trnp1Q80ZI1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.96■■□□□ 1.11
Trnp1Q80ZI1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trnp1Q80ZI1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trnp1Q80ZI1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
Trnp1Q80ZI1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.96■■□□□ 1.11
Trnp1Q80ZI1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.96■■□□□ 1.11
Trnp1Q80ZI1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trnp1Q80ZI1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trnp1Q80ZI1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
Trnp1Q80ZI1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trnp1Q80ZI1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trnp1Q80ZI1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trnp1Q80ZI1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trnp1Q80ZI1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trnp1Q80ZI1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trnp1Q80ZI1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Trnp1Q80ZI1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.95■■□□□ 1.1
Trnp1Q80ZI1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.95■■□□□ 1.1
Trnp1Q80ZI1 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.95■■□□□ 1.1
Trnp1Q80ZI1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trnp1Q80ZI1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trnp1Q80ZI1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trnp1Q80ZI1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trnp1Q80ZI1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.94■■□□□ 1.1
Trnp1Q80ZI1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Trnp1Q80ZI1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trnp1Q80ZI1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trnp1Q80ZI1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trnp1Q80ZI1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Trnp1Q80ZI1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Trnp1Q80ZI1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trnp1Q80ZI1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.93■■□□□ 1.1
Trnp1Q80ZI1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trnp1Q80ZI1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Trnp1Q80ZI1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Trnp1Q80ZI1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trnp1Q80ZI1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trnp1Q80ZI1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trnp1Q80ZI1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trnp1Q80ZI1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trnp1Q80ZI1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trnp1Q80ZI1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trnp1Q80ZI1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trnp1Q80ZI1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trnp1Q80ZI1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trnp1Q80ZI1 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.92■■□□□ 1.1
Trnp1Q80ZI1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.92■■□□□ 1.1
Trnp1Q80ZI1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Trnp1Q80ZI1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trnp1Q80ZI1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trnp1Q80ZI1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trnp1Q80ZI1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trnp1Q80ZI1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trnp1Q80ZI1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trnp1Q80ZI1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trnp1Q80ZI1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trnp1Q80ZI1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trnp1Q80ZI1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trnp1Q80ZI1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.9■■□□□ 1.1
Trnp1Q80ZI1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.9■■□□□ 1.1
Trnp1Q80ZI1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.9■■□□□ 1.1
Trnp1Q80ZI1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trnp1Q80ZI1 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.9■■□□□ 1.1
Trnp1Q80ZI1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trnp1Q80ZI1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.9■■□□□ 1.1
Trnp1Q80ZI1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms