Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc116Q80X53 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc116Q80X53 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc116Q80X53 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc116Q80X53 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc116Q80X53 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc116Q80X53 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc116Q80X53 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc116Q80X53 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.89■□□□□ 0.61
Ccdc116Q80X53 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ccdc116Q80X53 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc116Q80X53 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc116Q80X53 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc116Q80X53 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.89■□□□□ 0.61
Ccdc116Q80X53 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc116Q80X53 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc116Q80X53 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc116Q80X53 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc116Q80X53 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc116Q80X53 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc116Q80X53 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc116Q80X53 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc116Q80X53 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.87■□□□□ 0.61
Ccdc116Q80X53 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc116Q80X53 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc116Q80X53 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc116Q80X53 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.86■□□□□ 0.61
Ccdc116Q80X53 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc116Q80X53 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc116Q80X53 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.86■□□□□ 0.61
Ccdc116Q80X53 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc116Q80X53 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc116Q80X53 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.86■□□□□ 0.61
Ccdc116Q80X53 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc116Q80X53 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.86■□□□□ 0.61
Ccdc116Q80X53 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc116Q80X53 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc116Q80X53 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc116Q80X53 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc116Q80X53 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc116Q80X53 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc116Q80X53 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc116Q80X53 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.85■□□□□ 0.61
Ccdc116Q80X53 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.85■□□□□ 0.61
Ccdc116Q80X53 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc116Q80X53 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc116Q80X53 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc116Q80X53 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc116Q80X53 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc116Q80X53 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc116Q80X53 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc116Q80X53 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc116Q80X53 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc116Q80X53 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.84■□□□□ 0.61
Ccdc116Q80X53 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc116Q80X53 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.84■□□□□ 0.61
Ccdc116Q80X53 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc116Q80X53 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc116Q80X53 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ccdc116Q80X53 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Ccdc116Q80X53 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.61
Ccdc116Q80X53 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc116Q80X53 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.83■□□□□ 0.6
Ccdc116Q80X53 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc116Q80X53 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc116Q80X53 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc116Q80X53 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc116Q80X53 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc116Q80X53 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc116Q80X53 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.81■□□□□ 0.6
Ccdc116Q80X53 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc116Q80X53 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms