Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Trim36Q80WG7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.56■□□□□ 0.56
Trim36Q80WG7 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.56■□□□□ 0.56
Trim36Q80WG7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim36Q80WG7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.54■□□□□ 0.56
Trim36Q80WG7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim36Q80WG7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim36Q80WG7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.53■□□□□ 0.56
Trim36Q80WG7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Trim36Q80WG7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim36Q80WG7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim36Q80WG7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim36Q80WG7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim36Q80WG7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim36Q80WG7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim36Q80WG7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim36Q80WG7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.52■□□□□ 0.56
Trim36Q80WG7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim36Q80WG7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim36Q80WG7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trim36Q80WG7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim36Q80WG7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Trim36Q80WG7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.51■□□□□ 0.55
Trim36Q80WG7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim36Q80WG7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms