Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
Prpf40bQ80W14 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Prpf40bQ80W14 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Prpf40bQ80W14 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Prpf40bQ80W14 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Prpf40bQ80W14 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Prpf40bQ80W14 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Prpf40bQ80W14 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Prpf40bQ80W14 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Prpf40bQ80W14 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.26■■□□□ 1.15
Prpf40bQ80W14 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.26■■□□□ 1.15
Prpf40bQ80W14 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Prpf40bQ80W14 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Prpf40bQ80W14 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC22.26■■□□□ 1.15
Prpf40bQ80W14 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.26■■□□□ 1.15
Prpf40bQ80W14 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
Prpf40bQ80W14 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Prpf40bQ80W14 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Prpf40bQ80W14 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Prpf40bQ80W14 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Prpf40bQ80W14 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Prpf40bQ80W14 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Prpf40bQ80W14 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.25■■□□□ 1.15
Prpf40bQ80W14 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Prpf40bQ80W14 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Prpf40bQ80W14 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Prpf40bQ80W14 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Prpf40bQ80W14 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Prpf40bQ80W14 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Prpf40bQ80W14 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.24■■□□□ 1.15
Prpf40bQ80W14 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.24■■□□□ 1.15
Prpf40bQ80W14 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Prpf40bQ80W14 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Prpf40bQ80W14 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Prpf40bQ80W14 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.24■■□□□ 1.15
Prpf40bQ80W14 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Prpf40bQ80W14 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.23■■□□□ 1.15
Prpf40bQ80W14 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Prpf40bQ80W14 Gm37035-201ENSMUST00000194809 2148 ntBASIC22.22■■□□□ 1.15
Prpf40bQ80W14 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.22■■□□□ 1.15
Prpf40bQ80W14 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Prpf40bQ80W14 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Prpf40bQ80W14 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.22■■□□□ 1.15
Prpf40bQ80W14 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Prpf40bQ80W14 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Prpf40bQ80W14 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Prpf40bQ80W14 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Prpf40bQ80W14 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Prpf40bQ80W14 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Prpf40bQ80W14 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Prpf40bQ80W14 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Prpf40bQ80W14 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Prpf40bQ80W14 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Prpf40bQ80W14 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Prpf40bQ80W14 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Prpf40bQ80W14 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Prpf40bQ80W14 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Prpf40bQ80W14 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Prpf40bQ80W14 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.2■■□□□ 1.14
Prpf40bQ80W14 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Prpf40bQ80W14 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Prpf40bQ80W14 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Prpf40bQ80W14 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Prpf40bQ80W14 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Prpf40bQ80W14 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Prpf40bQ80W14 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Prpf40bQ80W14 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Prpf40bQ80W14 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Prpf40bQ80W14 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.19■■□□□ 1.14
Prpf40bQ80W14 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Prpf40bQ80W14 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Prpf40bQ80W14 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Prpf40bQ80W14 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Prpf40bQ80W14 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Prpf40bQ80W14 Gm13168-201ENSMUST00000121771 632 ntBASIC22.19■■□□□ 1.14
Prpf40bQ80W14 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Prpf40bQ80W14 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.19■■□□□ 1.14
Prpf40bQ80W14 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Prpf40bQ80W14 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Prpf40bQ80W14 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Prpf40bQ80W14 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Prpf40bQ80W14 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Prpf40bQ80W14 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Prpf40bQ80W14 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Prpf40bQ80W14 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.18■■□□□ 1.14
Prpf40bQ80W14 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Prpf40bQ80W14 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms