Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp8Q80U87 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp8Q80U87 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp8Q80U87 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp8Q80U87 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.24■□□□□ 0.67
Usp8Q80U87 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Usp8Q80U87 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp8Q80U87 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.24■□□□□ 0.67
Usp8Q80U87 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp8Q80U87 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp8Q80U87 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp8Q80U87 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp8Q80U87 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Usp8Q80U87 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Usp8Q80U87 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp8Q80U87 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp8Q80U87 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.23■□□□□ 0.67
Usp8Q80U87 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.23■□□□□ 0.67
Usp8Q80U87 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.23■□□□□ 0.67
Usp8Q80U87 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp8Q80U87 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp8Q80U87 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Usp8Q80U87 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Usp8Q80U87 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp8Q80U87 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Usp8Q80U87 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp8Q80U87 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp8Q80U87 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp8Q80U87 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp8Q80U87 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp8Q80U87 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Usp8Q80U87 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.21■□□□□ 0.67
Usp8Q80U87 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp8Q80U87 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp8Q80U87 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp8Q80U87 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp8Q80U87 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp8Q80U87 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp8Q80U87 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp8Q80U87 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp8Q80U87 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp8Q80U87 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp8Q80U87 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp8Q80U87 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp8Q80U87 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Usp8Q80U87 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp8Q80U87 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Usp8Q80U87 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp8Q80U87 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp8Q80U87 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.2■□□□□ 0.66
Usp8Q80U87 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Usp8Q80U87 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp8Q80U87 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp8Q80U87 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Usp8Q80U87 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp8Q80U87 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.19■□□□□ 0.66
Usp8Q80U87 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp8Q80U87 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp8Q80U87 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Usp8Q80U87 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.19■□□□□ 0.66
Usp8Q80U87 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp8Q80U87 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp8Q80U87 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp8Q80U87 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp8Q80U87 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp8Q80U87 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp8Q80U87 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp8Q80U87 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp8Q80U87 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp8Q80U87 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp8Q80U87 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp8Q80U87 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp8Q80U87 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp8Q80U87 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp8Q80U87 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp8Q80U87 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Usp8Q80U87 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp8Q80U87 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp8Q80U87 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
Usp8Q80U87 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
Usp8Q80U87 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp8Q80U87 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp8Q80U87 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp8Q80U87 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp8Q80U87 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp8Q80U87 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp8Q80U87 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Usp8Q80U87 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp8Q80U87 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Usp8Q80U87 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.16■□□□□ 0.66
Usp8Q80U87 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.16■□□□□ 0.66
Usp8Q80U87 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp8Q80U87 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp8Q80U87 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp8Q80U87 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp8Q80U87 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp8Q80U87 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp8Q80U87 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp8Q80U87 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.16■□□□□ 0.66
Usp8Q80U87 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms