Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh19Q80TF3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdh19Q80TF3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.94■□□□□ 0.62
Pcdh19Q80TF3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdh19Q80TF3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh19Q80TF3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdh19Q80TF3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh19Q80TF3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pcdh19Q80TF3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh19Q80TF3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh19Q80TF3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh19Q80TF3 Gm29257-201ENSMUST00000186115 639 ntBASIC18.93■□□□□ 0.62
Pcdh19Q80TF3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.93■□□□□ 0.62
Pcdh19Q80TF3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh19Q80TF3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdh19Q80TF3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdh19Q80TF3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh19Q80TF3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh19Q80TF3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.92■□□□□ 0.62
Pcdh19Q80TF3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh19Q80TF3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh19Q80TF3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh19Q80TF3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh19Q80TF3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh19Q80TF3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdh19Q80TF3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh19Q80TF3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh19Q80TF3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdh19Q80TF3 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.9■□□□□ 0.62
Pcdh19Q80TF3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh19Q80TF3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh19Q80TF3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.9■□□□□ 0.62
Pcdh19Q80TF3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.9■□□□□ 0.62
Pcdh19Q80TF3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdh19Q80TF3 Gm7514-201ENSMUST00000209475 934 ntBASIC18.9■□□□□ 0.62
Pcdh19Q80TF3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh19Q80TF3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh19Q80TF3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdh19Q80TF3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh19Q80TF3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh19Q80TF3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh19Q80TF3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.89■□□□□ 0.62
Pcdh19Q80TF3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh19Q80TF3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh19Q80TF3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh19Q80TF3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Pcdh19Q80TF3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh19Q80TF3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.89■□□□□ 0.61
Pcdh19Q80TF3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh19Q80TF3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh19Q80TF3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh19Q80TF3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh19Q80TF3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Pcdh19Q80TF3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh19Q80TF3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh19Q80TF3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh19Q80TF3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Pcdh19Q80TF3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh19Q80TF3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh19Q80TF3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pcdh19Q80TF3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh19Q80TF3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh19Q80TF3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh19Q80TF3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh19Q80TF3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdh19Q80TF3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh19Q80TF3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms