Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rfx4Q7TNK1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Rfx4Q7TNK1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx4Q7TNK1 AA386476-201ENSMUST00000098781 1665 ntBASIC18.48■□□□□ 0.55
Rfx4Q7TNK1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
Rfx4Q7TNK1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx4Q7TNK1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx4Q7TNK1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx4Q7TNK1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx4Q7TNK1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx4Q7TNK1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rfx4Q7TNK1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx4Q7TNK1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx4Q7TNK1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx4Q7TNK1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx4Q7TNK1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.47■□□□□ 0.55
Rfx4Q7TNK1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx4Q7TNK1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.47■□□□□ 0.55
Rfx4Q7TNK1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx4Q7TNK1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx4Q7TNK1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Rfx4Q7TNK1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx4Q7TNK1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx4Q7TNK1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx4Q7TNK1 Cap2-205ENSMUST00000225824 1634 ntBASIC18.46■□□□□ 0.55
Rfx4Q7TNK1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx4Q7TNK1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.46■□□□□ 0.55
Rfx4Q7TNK1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx4Q7TNK1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx4Q7TNK1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rfx4Q7TNK1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx4Q7TNK1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rfx4Q7TNK1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rfx4Q7TNK1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx4Q7TNK1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx4Q7TNK1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx4Q7TNK1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.43■□□□□ 0.54
Rfx4Q7TNK1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.43■□□□□ 0.54
Rfx4Q7TNK1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.43■□□□□ 0.54
Rfx4Q7TNK1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.43■□□□□ 0.54
Rfx4Q7TNK1 Gm43566-201ENSMUST00000196851 808 ntBASIC18.43■□□□□ 0.54
Rfx4Q7TNK1 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.43■□□□□ 0.54
Rfx4Q7TNK1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx4Q7TNK1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rfx4Q7TNK1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx4Q7TNK1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Rfx4Q7TNK1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx4Q7TNK1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 Rarb-207ENSMUST00000225921 2756 ntBASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms