Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf139Q7TMV1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf139Q7TMV1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf139Q7TMV1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf139Q7TMV1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.67■□□□□ 0.9
Rnf139Q7TMV1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf139Q7TMV1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf139Q7TMV1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Rnf139Q7TMV1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rnf139Q7TMV1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.66■□□□□ 0.9
Rnf139Q7TMV1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf139Q7TMV1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf139Q7TMV1 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.65■□□□□ 0.9
Rnf139Q7TMV1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rnf139Q7TMV1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rnf139Q7TMV1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf139Q7TMV1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.65■□□□□ 0.9
Rnf139Q7TMV1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf139Q7TMV1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rnf139Q7TMV1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf139Q7TMV1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf139Q7TMV1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rnf139Q7TMV1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf139Q7TMV1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf139Q7TMV1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
Rnf139Q7TMV1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.64■□□□□ 0.89
Rnf139Q7TMV1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Rnf139Q7TMV1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf139Q7TMV1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rnf139Q7TMV1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Rnf139Q7TMV1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rnf139Q7TMV1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.64■□□□□ 0.89
Rnf139Q7TMV1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.64■□□□□ 0.89
Rnf139Q7TMV1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf139Q7TMV1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf139Q7TMV1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rnf139Q7TMV1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf139Q7TMV1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf139Q7TMV1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf139Q7TMV1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf139Q7TMV1 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.63■□□□□ 0.89
Rnf139Q7TMV1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf139Q7TMV1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf139Q7TMV1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.63■□□□□ 0.89
Rnf139Q7TMV1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf139Q7TMV1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf139Q7TMV1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf139Q7TMV1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf139Q7TMV1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rnf139Q7TMV1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf139Q7TMV1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.62■□□□□ 0.89
Rnf139Q7TMV1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf139Q7TMV1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf139Q7TMV1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf139Q7TMV1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf139Q7TMV1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf139Q7TMV1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Rnf139Q7TMV1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf139Q7TMV1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Rnf139Q7TMV1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf139Q7TMV1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf139Q7TMV1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf139Q7TMV1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf139Q7TMV1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf139Q7TMV1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf139Q7TMV1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.61■□□□□ 0.89
Rnf139Q7TMV1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf139Q7TMV1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rnf139Q7TMV1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf139Q7TMV1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf139Q7TMV1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.6■□□□□ 0.89
Rnf139Q7TMV1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf139Q7TMV1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rnf139Q7TMV1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf139Q7TMV1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf139Q7TMV1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
Rnf139Q7TMV1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf139Q7TMV1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf139Q7TMV1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.59■□□□□ 0.89
Rnf139Q7TMV1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rnf139Q7TMV1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf139Q7TMV1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rnf139Q7TMV1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Rnf139Q7TMV1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf139Q7TMV1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms