Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn4bQ7M729 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn4bQ7M729 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn4bQ7M729 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn4bQ7M729 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn4bQ7M729 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn4bQ7M729 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Scn4bQ7M729 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn4bQ7M729 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scn4bQ7M729 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn4bQ7M729 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn4bQ7M729 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Scn4bQ7M729 Gm8493-201ENSMUST00000196881 489 ntBASIC18.75■□□□□ 0.59
Scn4bQ7M729 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scn4bQ7M729 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.75■□□□□ 0.59
Scn4bQ7M729 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.75■□□□□ 0.59
Scn4bQ7M729 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Scn4bQ7M729 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.75■□□□□ 0.59
Scn4bQ7M729 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn4bQ7M729 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn4bQ7M729 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn4bQ7M729 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn4bQ7M729 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Scn4bQ7M729 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn4bQ7M729 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn4bQ7M729 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn4bQ7M729 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn4bQ7M729 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.74■□□□□ 0.59
Scn4bQ7M729 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.74■□□□□ 0.59
Scn4bQ7M729 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn4bQ7M729 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn4bQ7M729 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.74■□□□□ 0.59
Scn4bQ7M729 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.74■□□□□ 0.59
Scn4bQ7M729 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn4bQ7M729 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn4bQ7M729 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn4bQ7M729 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn4bQ7M729 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn4bQ7M729 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.73■□□□□ 0.59
Scn4bQ7M729 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn4bQ7M729 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Scn4bQ7M729 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn4bQ7M729 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.73■□□□□ 0.59
Scn4bQ7M729 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn4bQ7M729 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Scn4bQ7M729 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn4bQ7M729 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn4bQ7M729 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn4bQ7M729 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn4bQ7M729 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn4bQ7M729 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Scn4bQ7M729 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn4bQ7M729 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn4bQ7M729 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn4bQ7M729 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn4bQ7M729 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Scn4bQ7M729 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn4bQ7M729 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Scn4bQ7M729 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Scn4bQ7M729 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn4bQ7M729 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn4bQ7M729 Gm43173-201ENSMUST00000202246 593 ntBASIC18.71■□□□□ 0.59
Scn4bQ7M729 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.71■□□□□ 0.59
Scn4bQ7M729 Gm6139-201ENSMUST00000079261 882 ntBASIC18.71■□□□□ 0.59
Scn4bQ7M729 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn4bQ7M729 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Scn4bQ7M729 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Scn4bQ7M729 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn4bQ7M729 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn4bQ7M729 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn4bQ7M729 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Scn4bQ7M729 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Scn4bQ7M729 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn4bQ7M729 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.7■□□□□ 0.58
Scn4bQ7M729 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn4bQ7M729 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn4bQ7M729 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn4bQ7M729 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn4bQ7M729 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.7■□□□□ 0.58
Scn4bQ7M729 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn4bQ7M729 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn4bQ7M729 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn4bQ7M729 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn4bQ7M729 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn4bQ7M729 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn4bQ7M729 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn4bQ7M729 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn4bQ7M729 Smad6-203ENSMUST00000179458 273 ntBASIC18.69■□□□□ 0.58
Scn4bQ7M729 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn4bQ7M729 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.69■□□□□ 0.58
Scn4bQ7M729 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.69■□□□□ 0.58
Scn4bQ7M729 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn4bQ7M729 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn4bQ7M729 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn4bQ7M729 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn4bQ7M729 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn4bQ7M729 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn4bQ7M729 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Scn4bQ7M729 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn4bQ7M729 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms