Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vma21Q78T54 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vma21Q78T54 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
Vma21Q78T54 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.71■□□□□ 0.11
Vma21Q78T54 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.71■□□□□ 0.11
Vma21Q78T54 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.71■□□□□ 0.11
Vma21Q78T54 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vma21Q78T54 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vma21Q78T54 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vma21Q78T54 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vma21Q78T54 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Vma21Q78T54 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vma21Q78T54 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vma21Q78T54 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vma21Q78T54 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Vma21Q78T54 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.7■□□□□ 0.1
Vma21Q78T54 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vma21Q78T54 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vma21Q78T54 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vma21Q78T54 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vma21Q78T54 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Vma21Q78T54 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vma21Q78T54 AA386476-201ENSMUST00000098781 1665 ntBASIC15.7■□□□□ 0.1
Vma21Q78T54 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vma21Q78T54 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.69■□□□□ 0.1
Vma21Q78T54 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vma21Q78T54 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.69■□□□□ 0.1
Vma21Q78T54 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vma21Q78T54 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vma21Q78T54 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vma21Q78T54 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.69■□□□□ 0.1
Vma21Q78T54 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vma21Q78T54 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vma21Q78T54 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vma21Q78T54 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vma21Q78T54 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vma21Q78T54 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vma21Q78T54 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vma21Q78T54 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vma21Q78T54 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.69■□□□□ 0.1
Vma21Q78T54 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.68■□□□□ 0.1
Vma21Q78T54 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vma21Q78T54 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vma21Q78T54 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vma21Q78T54 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vma21Q78T54 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vma21Q78T54 Gm22238-201ENSMUST00000175222 88 ntBASIC15.68■□□□□ 0.1
Vma21Q78T54 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.68■□□□□ 0.1
Vma21Q78T54 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vma21Q78T54 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vma21Q78T54 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vma21Q78T54 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vma21Q78T54 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vma21Q78T54 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.67■□□□□ 0.1
Vma21Q78T54 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vma21Q78T54 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.67■□□□□ 0.1
Vma21Q78T54 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vma21Q78T54 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.67■□□□□ 0.1
Vma21Q78T54 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.67■□□□□ 0.1
Vma21Q78T54 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.67■□□□□ 0.1
Vma21Q78T54 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.67■□□□□ 0.1
Vma21Q78T54 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Vma21Q78T54 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Vma21Q78T54 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.67■□□□□ 0.1
Vma21Q78T54 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vma21Q78T54 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.67■□□□□ 0.1
Vma21Q78T54 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Vma21Q78T54 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vma21Q78T54 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vma21Q78T54 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vma21Q78T54 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vma21Q78T54 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
Vma21Q78T54 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.66■□□□□ 0.1
Vma21Q78T54 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vma21Q78T54 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vma21Q78T54 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vma21Q78T54 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vma21Q78T54 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vma21Q78T54 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vma21Q78T54 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vma21Q78T54 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vma21Q78T54 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Vma21Q78T54 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.65■□□□□ 0.1
Vma21Q78T54 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.65■□□□□ 0.1
Vma21Q78T54 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.65■□□□□ 0.1
Vma21Q78T54 Gm9959-201ENSMUST00000068277 390 ntBASIC15.65■□□□□ 0.1
Vma21Q78T54 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vma21Q78T54 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.65■□□□□ 0.1
Vma21Q78T54 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.65■□□□□ 0.1
Vma21Q78T54 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vma21Q78T54 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vma21Q78T54 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vma21Q78T54 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.64■□□□□ 0.09
Vma21Q78T54 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vma21Q78T54 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vma21Q78T54 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vma21Q78T54 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Vma21Q78T54 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vma21Q78T54 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Vma21Q78T54 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms