Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx9Q6XAS3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.17■□□□□ 0.66
Ssx9Q6XAS3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx9Q6XAS3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ssx9Q6XAS3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx9Q6XAS3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx9Q6XAS3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx9Q6XAS3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx9Q6XAS3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx9Q6XAS3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx9Q6XAS3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx9Q6XAS3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx9Q6XAS3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Spcs1-204ENSMUST00000226782 949 ntBASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx9Q6XAS3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ssx9Q6XAS3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx9Q6XAS3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx9Q6XAS3 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.14■□□□□ 0.65
Ssx9Q6XAS3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ssx9Q6XAS3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx9Q6XAS3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx9Q6XAS3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx9Q6XAS3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx9Q6XAS3 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Gm21956-201ENSMUST00000179946 522 ntBASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Gm13241-201ENSMUST00000094493 780 ntBASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx9Q6XAS3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx9Q6XAS3 Golph3-205ENSMUST00000228671 2842 ntBASIC19.11■□□□□ 0.65
Ssx9Q6XAS3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ssx9Q6XAS3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx9Q6XAS3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Ssx9Q6XAS3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx9Q6XAS3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx9Q6XAS3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx9Q6XAS3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx9Q6XAS3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx9Q6XAS3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.11■□□□□ 0.65
Ssx9Q6XAS3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.1■□□□□ 0.65
Ssx9Q6XAS3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ssx9Q6XAS3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.1■□□□□ 0.65
Ssx9Q6XAS3 Gm12251-201ENSMUST00000117893 792 ntBASIC19.1■□□□□ 0.65
Ssx9Q6XAS3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ssx9Q6XAS3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ssx9Q6XAS3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms