Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rif1Q6PR54 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rif1Q6PR54 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rif1Q6PR54 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rif1Q6PR54 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rif1Q6PR54 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rif1Q6PR54 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Rif1Q6PR54 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rif1Q6PR54 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rif1Q6PR54 Gm38205-201ENSMUST00000192243 258 ntBASIC16.32■□□□□ 0.2
Rif1Q6PR54 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.32■□□□□ 0.2
Rif1Q6PR54 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.32■□□□□ 0.2
Rif1Q6PR54 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.32■□□□□ 0.2
Rif1Q6PR54 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rif1Q6PR54 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Rif1Q6PR54 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rif1Q6PR54 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rif1Q6PR54 Gm13559-201ENSMUST00000120476 863 ntBASIC16.31■□□□□ 0.2
Rif1Q6PR54 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.31■□□□□ 0.2
Rif1Q6PR54 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rif1Q6PR54 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rif1Q6PR54 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rif1Q6PR54 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rif1Q6PR54 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.3■□□□□ 0.2
Rif1Q6PR54 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rif1Q6PR54 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rif1Q6PR54 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rif1Q6PR54 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rif1Q6PR54 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rif1Q6PR54 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rif1Q6PR54 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rif1Q6PR54 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rif1Q6PR54 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rif1Q6PR54 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.3■□□□□ 0.2
Rif1Q6PR54 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rif1Q6PR54 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rif1Q6PR54 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.29■□□□□ 0.2
Rif1Q6PR54 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rif1Q6PR54 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.29■□□□□ 0.2
Rif1Q6PR54 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rif1Q6PR54 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rif1Q6PR54 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rif1Q6PR54 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rif1Q6PR54 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rif1Q6PR54 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rif1Q6PR54 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.29■□□□□ 0.2
Rif1Q6PR54 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rif1Q6PR54 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rif1Q6PR54 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rif1Q6PR54 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rif1Q6PR54 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rif1Q6PR54 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rif1Q6PR54 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rif1Q6PR54 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.28■□□□□ 0.2
Rif1Q6PR54 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rif1Q6PR54 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rif1Q6PR54 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.28■□□□□ 0.2
Rif1Q6PR54 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rif1Q6PR54 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rif1Q6PR54 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rif1Q6PR54 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rif1Q6PR54 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rif1Q6PR54 AA414768-201ENSMUST00000121924 1257 ntBASIC16.27■□□□□ 0.2
Rif1Q6PR54 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rif1Q6PR54 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rif1Q6PR54 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rif1Q6PR54 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rif1Q6PR54 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Rif1Q6PR54 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rif1Q6PR54 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rif1Q6PR54 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rif1Q6PR54 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.26■□□□□ 0.19
Rif1Q6PR54 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rif1Q6PR54 Gm11539-201ENSMUST00000119837 557 ntBASIC16.26■□□□□ 0.19
Rif1Q6PR54 Gm13436-201ENSMUST00000120418 567 ntBASIC16.26■□□□□ 0.19
Rif1Q6PR54 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rif1Q6PR54 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rif1Q6PR54 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.26■□□□□ 0.19
Rif1Q6PR54 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rif1Q6PR54 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rif1Q6PR54 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms